RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 SENP7Q9BQF6 1050 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 CBWD1Q9BRT8 395 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 SIKE1Q9BRV8 207 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 TSEN34Q9BSV6 310 aaKnown RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 FAM167BQ9BTA0 163 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 WDR18Q9BV38 432 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 FRMD8Q9BZ67 464 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 DEFB129Q9H1M3 183 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 RANBP17Q9H2T7 1088 aaKnown RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 MANSC1Q9H8J5 431 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 VCX3AQ9NNX9 186 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 CYLDQ9NQC7 956 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 PARVAQ9NVD7 372 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 MAP3K20Q9NYL2 800 aaKnown RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 STX18Q9P2W9 335 aaKnown RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 HERC5Q9UII4 1024 aaKnown RBP5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 PRR12Q9ULL5 1215 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 TBX20Q9UMR3 447 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 POLIQ9UNA4 740 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 TRIM33Q9UPN9 1127 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZNF148Q9UQR1 794 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 EFR3BQ9Y2G0 817 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 ASB3Q9Y575 518 aa5.22□□□□□ -1.57
HMGB3P16-201ENST00000508037 STRCQ7RTU9 1775 aa5.21□□□□□ -1.57
HMGB3P16-201ENST00000508037 KLRG2A4D1S0 409 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 DPPA5A6NC42 116 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 ENO4A6NNW6 628 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 I3L4J1 428 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 KLF11O14901 512 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 TLR3O15455 904 aaKnown RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 GRIN3BO60391 1043 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 SPAG7O75391 227 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 SKAP2O75563 359 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 PSMG1O95456 288 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 LSM8O95777 96 aaKnown RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 MT-ND3P03897 115 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 KRT1P04264 644 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 PDHA1P08559 390 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 KRT7P08729 469 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 T-ENOLP0DO92 83 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 ESRRAP11474 423 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 GNAT1P11488 350 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 CETPP11597 493 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 KRT4P19013 534 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 KCNA3P22001 575 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 SP100P23497 879 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 ALDH1B1P30837 517 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 YWHABP31946 246 aaKnown RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 RPA3P35244 121 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 ABL2P42684 1182 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 VPS41P49754 854 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 RARRES1P49788 294 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 CLCN2P51788 898 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 RAP1GDS1P52306 607 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 AP3M2P53677 418 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 VCPP55072 806 aaKnown RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 RTP1P59025 263 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 RAB15P59190 212 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 RPL26P61254 145 aaKnown RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 PSMC5P62195 406 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 AP2B1P63010 937 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 XIAPP98170 497 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 CDK16Q00536 496 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 KRT76Q01546 638 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 CYP24A1Q07973 514 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 PDIA2Q13087 525 aaKnown RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 GPS1Q13098 491 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 CUL3Q13618 768 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 RCN2Q14257 317 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 PIGHQ14442 188 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 RCN1Q15293 331 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 PKN2Q16513 984 aaKnown RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 DBN1Q16643 649 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 CCDC142Q17RM4 750 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 TRMT5Q32P41 509 aaKnown RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 BRDTQ58F21 947 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 TFDP3Q5H9I0 405 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 INTS6LQ5JSJ4 861 aaKnown RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZFYVE27Q5T4F4 411 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 UBAP2Q5T6F2 1119 aaKnown RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 SNX30Q5VWJ9 437 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 ATG16L1Q676U5 607 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 CIAPIN1Q6FI81 312 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 PLEKHA7Q6IQ23 1121 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 XRRA1Q6P2D8 792 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 MTHFD1LQ6UB35 978 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 MON1BQ7L1V2 547 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 PODNQ7Z5L7 613 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 POLNQ7Z5Q5 900 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 SDCCAG8Q86SQ7 713 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 MTDHQ86UE4 582 aaKnown RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 TMPRSS6Q8IU80 811 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZBED8Q8IZ13 594 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 PDIK1LQ8N165 341 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 LINC00528Q8N1L1 170 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 GPD1LQ8N335 351 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 MTMR14Q8NCE2 650 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 MCPH1Q8NEM0 835 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 CYP2W1Q8TAV3 490 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 PYROXD1Q8WU10 500 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms