RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 TDP1Q9NUW8 608 aa17.01■□□□□ 0.31
SSBP2-207ENST00000507472 R3HCC1Q9Y3T6 440 aaKnown RBP17.01■□□□□ 0.31
SSBP2-207ENST00000507472 DNAH14Q0VDD8 3507 aa17.01■□□□□ 0.31
SSBP2-207ENST00000507472 TGFB1I1O43294 461 aa17■□□□□ 0.31
SSBP2-207ENST00000507472 ATP2C2O75185 946 aa17■□□□□ 0.31
SSBP2-207ENST00000507472 TNNC2P02585 160 aa17■□□□□ 0.31
SSBP2-207ENST00000507472 LMO2P25791 158 aa17■□□□□ 0.31
SSBP2-207ENST00000507472 DDX6P26196 483 aaKnown RBP eCLIP17■□□□□ 0.31
SSBP2-207ENST00000507472 PCSK1P29120 753 aa17■□□□□ 0.31
SSBP2-207ENST00000507472 FAM26FQ5R3K3 315 aa17■□□□□ 0.31
SSBP2-207ENST00000507472 FAM171BQ6P995 826 aa17■□□□□ 0.31
SSBP2-207ENST00000507472 DPH6Q7L8W6 267 aa17■□□□□ 0.31
SSBP2-207ENST00000507472 LIMS2Q7Z4I7 341 aa17■□□□□ 0.31
SSBP2-207ENST00000507472 SPATA2LQ8IUW3 424 aaPredicted RBP17■□□□□ 0.31
SSBP2-207ENST00000507472 SPATA18Q8TC71 538 aa17■□□□□ 0.31
SSBP2-207ENST00000507472 SNX21Q969T3 373 aa17■□□□□ 0.31
SSBP2-207ENST00000507472 C7orf25Q9BPX7 421 aa17■□□□□ 0.31
SSBP2-207ENST00000507472 KIAA1586Q9HCI6 787 aa17■□□□□ 0.31
SSBP2-207ENST00000507472 C2orf42Q9NWW7 574 aa17■□□□□ 0.31
SSBP2-207ENST00000507472 SDK1Q7Z5N4 2213 aa17■□□□□ 0.31
SSBP2-207ENST00000507472 OTOL1A6NHN0 477 aaPredicted RBP16.99■□□□□ 0.31
SSBP2-207ENST00000507472 SOBPA7XYQ1 873 aa16.99■□□□□ 0.31
SSBP2-207ENST00000507472 EIF3DO15371 548 aaKnown RBP eCLIP16.99■□□□□ 0.31
SSBP2-207ENST00000507472 POLR2DO15514 142 aaKnown RBP16.99■□□□□ 0.31
SSBP2-207ENST00000507472 NOL4O94818 638 aa16.99■□□□□ 0.31
SSBP2-207ENST00000507472 CASP1P29466 404 aa16.99■□□□□ 0.31
SSBP2-207ENST00000507472 DMWDQ09019 674 aa16.99■□□□□ 0.31
SSBP2-207ENST00000507472 CCINQ13939 588 aa16.99■□□□□ 0.31
SSBP2-207ENST00000507472 LPAL2Q16609 132 aa16.99■□□□□ 0.31
SSBP2-207ENST00000507472 CFAP221Q4G0U5 840 aa16.99■□□□□ 0.31
SSBP2-207ENST00000507472 TRIM68Q6AZZ1 485 aa16.99■□□□□ 0.31
SSBP2-207ENST00000507472 SCN4BQ8IWT1 228 aa16.99■□□□□ 0.31
SSBP2-207ENST00000507472 RIN3Q8TB24 985 aa16.99■□□□□ 0.31
SSBP2-207ENST00000507472 KBTBD7Q8WVZ9 684 aa16.99■□□□□ 0.31
SSBP2-207ENST00000507472 SECISBP2LQ93073 1101 aaKnown RBP16.99■□□□□ 0.31
SSBP2-207ENST00000507472 TRMT2BQ96GJ1 504 aaKnown RBP16.99■□□□□ 0.31
SSBP2-207ENST00000507472 MYRFLQ96LU7 910 aa16.99■□□□□ 0.31
SSBP2-207ENST00000507472 EBF3Q9H4W6 596 aa16.99■□□□□ 0.31
SSBP2-207ENST00000507472 HPS4Q9NQG7 708 aa16.99■□□□□ 0.31
SSBP2-207ENST00000507472 AGPAT3Q9NRZ7 376 aa16.99■□□□□ 0.31
SSBP2-207ENST00000507472 CHURC1-FNTBB4DL54 471 aa16.98■□□□□ 0.31
SSBP2-207ENST00000507472 K7ESF4 209 aa16.98■□□□□ 0.31
SSBP2-207ENST00000507472 CLIC2O15247 247 aa16.98■□□□□ 0.31
SSBP2-207ENST00000507472 TADA3O75528 432 aa16.98■□□□□ 0.31
SSBP2-207ENST00000507472 CST3P01034 146 aaPredicted RBP16.98■□□□□ 0.31
SSBP2-207ENST00000507472 PDGFRBP09619 1106 aa16.98■□□□□ 0.31
SSBP2-207ENST00000507472 ZSCAN22P10073 491 aaPredicted RBP16.98■□□□□ 0.31
SSBP2-207ENST00000507472 DLATP10515 647 aaKnown RBP16.98■□□□□ 0.31
SSBP2-207ENST00000507472 FNTBP49356 437 aa16.98■□□□□ 0.31
SSBP2-207ENST00000507472 PSMC1P62191 440 aaKnown RBP16.98■□□□□ 0.31
SSBP2-207ENST00000507472 RUNX3Q13761 415 aa16.98■□□□□ 0.31
SSBP2-207ENST00000507472 PUM1Q14671 1186 aaKnown RBP eCLIP16.98■□□□□ 0.31
SSBP2-207ENST00000507472 SNRNP35Q16560 246 aaKnown RBP16.98■□□□□ 0.31
SSBP2-207ENST00000507472 TRAPPC11Q7Z392 1133 aa16.98■□□□□ 0.31
SSBP2-207ENST00000507472 WDR49Q8IV35 697 aa16.98■□□□□ 0.31
SSBP2-207ENST00000507472 NELFCDQ8IXH7 590 aa16.98■□□□□ 0.31
SSBP2-207ENST00000507472 SCFD1Q8WVM8 642 aa16.98■□□□□ 0.31
SSBP2-207ENST00000507472 FUBP3Q96I24 572 aaKnown RBP eCLIP16.98■□□□□ 0.31
SSBP2-207ENST00000507472 CYP2S1Q96SQ9 504 aa16.98■□□□□ 0.31
SSBP2-207ENST00000507472 MMS19Q96T76 1030 aa16.98■□□□□ 0.31
SSBP2-207ENST00000507472 BLZF1Q9H2G9 400 aa16.98■□□□□ 0.31
SSBP2-207ENST00000507472 UXTQ9UBK9 157 aaPredicted RBP16.98■□□□□ 0.31
SSBP2-207ENST00000507472 NUP210Q8TEM1 1887 aaPredicted RBP16.97■□□□□ 0.31
SSBP2-207ENST00000507472 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.97■□□□□ 0.31
SSBP2-207ENST00000507472 HRO43593 1189 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 PAPSS2O95340 614 aaPredicted RBP16.97■□□□□ 0.31
SSBP2-207ENST00000507472 ARSAP15289 507 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 TNNI1P19237 187 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 TGM1P22735 817 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 HOXC13P31276 330 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 CYP2J2P51589 502 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 EHHADHQ08426 723 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 RSPO4Q2I0M5 234 aaPredicted RBP16.97■□□□□ 0.31
SSBP2-207ENST00000507472 HEATR6Q6AI08 1181 aaKnown RBP16.97■□□□□ 0.31
SSBP2-207ENST00000507472 CC2D1AQ6P1N0 951 aaPredicted RBP16.97■□□□□ 0.31
SSBP2-207ENST00000507472 C4orf50Q6ZRC1 276 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 UNC13DQ70J99 1090 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 DGLUCYQ7Z3D6 616 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 SYNPOQ8N3V7 929 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 GPR161Q8N6U8 529 aaKnown RBP16.97■□□□□ 0.31
SSBP2-207ENST00000507472 CCDC127Q96BQ5 260 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 SLC22A12Q96S37 553 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 SYT15Q9BQS2 421 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 KIF9Q9HAQ2 790 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 TRPC7Q9HCX4 862 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 CRTAC1Q9NQ79 661 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 DLL3Q9NYJ7 618 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 MAGEC2Q9UBF1 373 aaPredicted RBP16.97■□□□□ 0.31
SSBP2-207ENST00000507472 CDH9Q9ULB4 789 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 RAB23Q9ULC3 237 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 PCDHA7Q9UN72 937 aa16.97■□□□□ 0.31
SSBP2-207ENST00000507472 HSP90AA1P07900 732 aaKnown RBP16.96■□□□□ 0.31
SSBP2-207ENST00000507472 WARSP23381 471 aaKnown RBP16.96■□□□□ 0.31
SSBP2-207ENST00000507472 BDNFP23560 247 aa16.96■□□□□ 0.31
SSBP2-207ENST00000507472 MAGEA11P43364 429 aa16.96■□□□□ 0.31
SSBP2-207ENST00000507472 ME1P48163 572 aa16.96■□□□□ 0.31
SSBP2-207ENST00000507472 SRSF5Q13243 272 aaKnown RBP16.96■□□□□ 0.31
SSBP2-207ENST00000507472 ZNF268Q14587 947 aaPredicted RBP16.96■□□□□ 0.31
SSBP2-207ENST00000507472 PSMD6Q15008 389 aa16.96■□□□□ 0.31
SSBP2-207ENST00000507472 PRR23BQ6ZRT6 265 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms