RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 PCDHB5Q9Y5E4 795 aa17.74■□□□□ 0.43
SNF8-205ENST00000507302 SLC26A4O43511 780 aa17.73■□□□□ 0.43
SNF8-205ENST00000507302 TOP3BO95985 862 aaKnown RBP17.73■□□□□ 0.43
SNF8-205ENST00000507302 GTF2BQ00403 316 aa17.73■□□□□ 0.43
SNF8-205ENST00000507302 TAF12Q16514 161 aa17.73■□□□□ 0.43
SNF8-205ENST00000507302 USP33Q8TEY7 942 aa17.73■□□□□ 0.43
SNF8-205ENST00000507302 LRRC15Q8TF66 581 aa17.73■□□□□ 0.43
SNF8-205ENST00000507302 ATP2A3Q93084 1043 aa17.73■□□□□ 0.43
SNF8-205ENST00000507302 CNOT6LQ96LI5 555 aaKnown RBP17.73■□□□□ 0.43
SNF8-205ENST00000507302 REEP2Q9BRK0 252 aa17.73■□□□□ 0.43
SNF8-205ENST00000507302 PYM1Q9BRP8 204 aaKnown RBP17.73■□□□□ 0.43
SNF8-205ENST00000507302 MSTO1Q9BUK6 570 aa17.73■□□□□ 0.43
SNF8-205ENST00000507302 ABI2Q9NYB9 513 aaPredicted RBP17.73■□□□□ 0.43
SNF8-205ENST00000507302 GCNT4Q9P109 453 aa17.73■□□□□ 0.43
SNF8-205ENST00000507302 FREM2Q5SZK8 3169 aa17.72■□□□□ 0.43
SNF8-205ENST00000507302 SRRM3A6NNA2 597 aaPredicted RBP17.72■□□□□ 0.43
SNF8-205ENST00000507302 KHNYNO15037 678 aaKnown RBP17.72■□□□□ 0.43
SNF8-205ENST00000507302 FOXC1Q12948 553 aa17.72■□□□□ 0.43
SNF8-205ENST00000507302 GNL2Q13823 731 aaKnown RBP17.72■□□□□ 0.43
SNF8-205ENST00000507302 NFE2Q16621 373 aaPredicted RBP17.72■□□□□ 0.43
SNF8-205ENST00000507302 GAB4Q2WGN9 574 aa17.72■□□□□ 0.43
SNF8-205ENST00000507302 CCDC26Q8TAB7 109 aa17.72■□□□□ 0.43
SNF8-205ENST00000507302 SLC22A12Q96S37 553 aa17.72■□□□□ 0.43
SNF8-205ENST00000507302 SCNM1Q9BWG6 230 aa17.72■□□□□ 0.43
SNF8-205ENST00000507302 DUS2Q9NX74 493 aaKnown RBP17.72■□□□□ 0.43
SNF8-205ENST00000507302 DPP3Q9NY33 737 aa17.72■□□□□ 0.43
SNF8-205ENST00000507302 UXTQ9UBK9 157 aaPredicted RBP17.72■□□□□ 0.43
SNF8-205ENST00000507302 PI4KAP42356 2102 aa17.72■□□□□ 0.43
SNF8-205ENST00000507302 KPNA7A9QM74 516 aa17.71■□□□□ 0.43
SNF8-205ENST00000507302 PATE3B3GLJ2 98 aa17.71■□□□□ 0.43
SNF8-205ENST00000507302 K7EQS6 105 aa17.71■□□□□ 0.43
SNF8-205ENST00000507302 SPINK2P20155 84 aa17.71■□□□□ 0.43
SNF8-205ENST00000507302 ABCD1P33897 745 aa17.71■□□□□ 0.43
SNF8-205ENST00000507302 GPR15P49685 360 aa17.71■□□□□ 0.43
SNF8-205ENST00000507302 CDR1P51861 262 aa17.71■□□□□ 0.43
SNF8-205ENST00000507302 USP39Q53GS9 565 aaKnown RBP17.71■□□□□ 0.43
SNF8-205ENST00000507302 CRELD2Q6UXH1 353 aaPredicted RBP17.71■□□□□ 0.43
SNF8-205ENST00000507302 NT5DC4Q86YG4 428 aa17.71■□□□□ 0.43
SNF8-205ENST00000507302 EFCAB13Q8IY85 973 aa17.71■□□□□ 0.43
SNF8-205ENST00000507302 KIAA1958Q8N8K9 716 aa17.71■□□□□ 0.43
SNF8-205ENST00000507302 ACBD6Q9BR61 282 aa17.71■□□□□ 0.43
SNF8-205ENST00000507302 ST6GALNAC4Q9H4F1 302 aa17.71■□□□□ 0.43
SNF8-205ENST00000507302 NEUROG3Q9Y4Z2 214 aa17.71■□□□□ 0.43
SNF8-205ENST00000507302 LAMA5O15230 3695 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 FAM221BA6H8Z2 402 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 UPK3BL1B0FP48 263 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 ANKRD63C9JTQ0 380 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 UPK3BL2E5RIL1 263 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 TRAK2O60296 914 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 USP17L7P0C7H9 530 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 BCKDHBP21953 392 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 OPRD1P41143 372 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 ACOT2P49753 483 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 DGKEP52429 567 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 IRX4P78413 519 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 SV2CQ496J9 727 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 ARL6IP4Q66PJ3 421 aaKnown RBP17.7■□□□□ 0.42
SNF8-205ENST00000507302 STKLD1Q8NE28 680 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 TSTD1Q8NFU3 115 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 CXorf38Q8TB03 319 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 FAM212AQ96EL1 285 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 CYP2S1Q96SQ9 504 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 PARVGQ9HBI0 331 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 MMP17Q9ULZ9 603 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 WNT6Q9Y6F9 365 aa17.7■□□□□ 0.42
SNF8-205ENST00000507302 CACNA1EQ15878 2313 aa17.69■□□□□ 0.42
SNF8-205ENST00000507302 K7ENM7 598 aa17.69■□□□□ 0.42
SNF8-205ENST00000507302 PRPF40AO75400 957 aaKnown RBP17.69■□□□□ 0.42
SNF8-205ENST00000507302 CAPNS1P04632 268 aa17.69■□□□□ 0.42
SNF8-205ENST00000507302 GBP1P32455 592 aa17.69■□□□□ 0.42
SNF8-205ENST00000507302 RPL10AP62906 217 aaKnown RBP17.69■□□□□ 0.42
SNF8-205ENST00000507302 ACAP1Q15027 740 aa17.69■□□□□ 0.42
SNF8-205ENST00000507302 CRY1Q16526 586 aa17.69■□□□□ 0.42
SNF8-205ENST00000507302 CFAP221Q4G0U5 840 aa17.69■□□□□ 0.42
SNF8-205ENST00000507302 RILPL1Q5EBL4 403 aa17.69■□□□□ 0.42
SNF8-205ENST00000507302 PEAR1Q5VY43 1037 aaPredicted RBP17.69■□□□□ 0.42
SNF8-205ENST00000507302 CYP2U1Q7Z449 544 aa17.69■□□□□ 0.42
SNF8-205ENST00000507302 PIP4P1Q86T03 277 aa17.69■□□□□ 0.42
SNF8-205ENST00000507302 MDGA1Q8NFP4 955 aa17.69■□□□□ 0.42
SNF8-205ENST00000507302 SPATA18Q8TC71 538 aa17.69■□□□□ 0.42
SNF8-205ENST00000507302 PLIN2Q99541 437 aa17.69■□□□□ 0.42
SNF8-205ENST00000507302 PI4K2AQ9BTU6 479 aa17.69■□□□□ 0.42
SNF8-205ENST00000507302 BLOC1S4Q9NUP1 217 aa17.69■□□□□ 0.42
SNF8-205ENST00000507302 ARHGAP26Q9UNA1 814 aa17.69■□□□□ 0.42
SNF8-205ENST00000507302 A0A0A0MRY4 1105 aa17.68■□□□□ 0.42
SNF8-205ENST00000507302 TRAV19A0A0A6YYK7 116 aa17.68■□□□□ 0.42
SNF8-205ENST00000507302 PFKLP17858 780 aa17.68■□□□□ 0.42
SNF8-205ENST00000507302 CYP2F1P24903 491 aa17.68■□□□□ 0.42
SNF8-205ENST00000507302 P2RY2P41231 377 aa17.68■□□□□ 0.42
SNF8-205ENST00000507302 PNPLA4P41247 253 aa17.68■□□□□ 0.42
SNF8-205ENST00000507302 ZXDBP98169 803 aa17.68■□□□□ 0.42
SNF8-205ENST00000507302 TSPY1Q01534 308 aa17.68■□□□□ 0.42
SNF8-205ENST00000507302 NR1H3Q13133 447 aa17.68■□□□□ 0.42
SNF8-205ENST00000507302 ZRSR1Q15695 479 aaKnown RBP17.68■□□□□ 0.42
SNF8-205ENST00000507302 DDR2Q16832 855 aa17.68■□□□□ 0.42
SNF8-205ENST00000507302 INTS6LQ5JSJ4 861 aaKnown RBP17.68■□□□□ 0.42
SNF8-205ENST00000507302 SPDYCQ5MJ68 293 aa17.68■□□□□ 0.42
SNF8-205ENST00000507302 SDHAF4Q5VUM1 108 aa17.68■□□□□ 0.42
SNF8-205ENST00000507302 SLFN12LQ6IEE8 588 aa17.68■□□□□ 0.42
SNF8-205ENST00000507302 LRSAM1Q6UWE0 723 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms