RNA–Protein interactions for RNA: ENST00000507197.5

SNHG4-204, Transcript of small nucleolar RNA host gene 4, human

TSL 2 BASIC

Gene SNHG4, Length 865 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG4-204	ENST00000507197	CUEDC2	Q9H467	287 aa		13.78	□□□□□ -0.2
SNHG4-204	ENST00000507197	SEMA4G	Q9NTN9	838 aa		13.78	□□□□□ -0.2
SNHG4-204	ENST00000507197	TMLHE	Q9NVH6	421 aa		13.78	□□□□□ -0.2
SNHG4-204	ENST00000507197	EHD2	Q9NZN4	543 aa		13.78	□□□□□ -0.2
SNHG4-204	ENST00000507197	GTF3C4	Q9UKN8	822 aa		13.78	□□□□□ -0.2
SNHG4-204	ENST00000507197	SLC8A2	Q9UPR5	921 aa		13.78	□□□□□ -0.2
SNHG4-204	ENST00000507197	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.78	□□□□□ -0.2
SNHG4-204	ENST00000507197	TRAV19	A0A0A6YYK7	116 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	GOLGA8IP	A6NC78	632 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	GOLGA8J	A6NMD2	632 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	GABRD	O14764	452 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	PRPF6	O94906	941 aa	Known RBP	13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	DRD1	P21728	446 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	CYP2F1	P24903	491 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	MAGEA11	P43364	429 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	CASP5	P51878	434 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	NR1H3	Q13133	447 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	STK38	Q15208	465 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	DDR2	Q16832	855 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	DUOXA2	Q1HG44	320 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	FAM173B	Q6P4H8	233 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	CAMKK1	Q8N5S9	505 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	LOXL4	Q96JB6	756 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	USP28	Q96RU2	1077 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	PANK2	Q9BZ23	570 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	EBF3	Q9H4W6	596 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	PCIF1	Q9H4Z3	704 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	PDE11A	Q9HCR9	933 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	PARD6A	Q9NPB6	346 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	INTS13	Q9NVM9	706 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	CCL26	Q9Y258	94 aa		13.77	□□□□□ -0.21
SNHG4-204	ENST00000507197	CEP250	Q9BV73	2442 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	AKAP3	O75969	853 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	CKM	P06732	381 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	PFKL	P17858	780 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	ACAT1	P24752	427 aa	Known RBP	13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	IFNAR2	P48551	515 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	NASP	P49321	788 aa	Predicted RBP	13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	GPR15	P49685	360 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	WNT7B	P56706	349 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	DMWD	Q09019	674 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	MTF1	Q14872	753 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	WDR44	Q5JSH3	913 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	VSTM1	Q6UX27	236 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	PRR23C	Q6ZRP0	262 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	SCN4B	Q8IWT1	228 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	PDILT	Q8N807	584 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	ZSWIM2	Q8NEG5	633 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	CXorf38	Q8TB03	319 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	OSCP1	Q8WVF1	389 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	DDX1	Q92499	740 aa	Known RBP	13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	ATP2A3	Q93084	1043 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	HPDL	Q96IR7	371 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	PKMYT1	Q99640	499 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	P2RY13	Q9BPV8	354 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	TRPC7	Q9HCX4	862 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	HPS4	Q9NQG7	708 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	SIX4	Q9UIU6	781 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	CDH9	Q9ULB4	789 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	SCN1A	P35498	2009 aa		13.76	□□□□□ -0.21
SNHG4-204	ENST00000507197	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	SLC30A4	O14863	429 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	EIF3D	O15371	548 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	STX6	O43752	255 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	PPP6R2	O75170	966 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	RPP40	O75818	363 aa	Known RBP	13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	CCDC192	P0DO97	292 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	ANXA13	P27216	316 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	SNRPF	P62306	86 aa	Known RBP	13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	KCNB1	Q14721	858 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	SOWAHA	Q2M3V2	549 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	SDHAF4	Q5VUM1	108 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	TRIM68	Q6AZZ1	485 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	FSTL4	Q6MZW2	842 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	FAM171B	Q6P995	826 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	CACNA2D4	Q7Z3S7	1137 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	WDR49	Q8IV35	697 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	FAM160A2	Q8N612	972 aa	Predicted RBP	13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	IQUB	Q8NA54	791 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	GAB3	Q8WWW8	586 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	SPATA17	Q96L03	361 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	ZNF396	Q96N95	335 aa	Predicted RBP	13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	FNBP1	Q96RU3	617 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	SYT15	Q9BQS2	421 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	ECT2	Q9H8V3	914 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	DUS2	Q9NX74	493 aa	Known RBP	13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	HSPBP1	Q9NZL4	362 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	MTMR6	Q9Y217	621 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197	ANK1	P16157	1881 aa		13.75	□□□□□ -0.21
SNHG4-204	ENST00000507197		A0A087X0B3	334 aa		13.74	□□□□□ -0.21
SNHG4-204	ENST00000507197	DCDC2B	A2VCK2	349 aa		13.74	□□□□□ -0.21
SNHG4-204	ENST00000507197	TRIM66	O15016	1216 aa		13.74	□□□□□ -0.21
SNHG4-204	ENST00000507197	SPTLC2	O15270	562 aa		13.74	□□□□□ -0.21
SNHG4-204	ENST00000507197	RNF40	O75150	1001 aa		13.74	□□□□□ -0.21
SNHG4-204	ENST00000507197	FAM163B	P0C2L3	166 aa		13.74	□□□□□ -0.21
SNHG4-204	ENST00000507197	PDIA4	P13667	645 aa	Known RBP	13.74	□□□□□ -0.21
SNHG4-204	ENST00000507197	ARSA	P15289	507 aa		13.74	□□□□□ -0.21
SNHG4-204	ENST00000507197	TCF3	P15923	654 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms