RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 ZNF677Q86XU0 584 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 LRRC8AQ8IWT6 810 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 DCUN1D1Q96GG9 259 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 RAD9AQ99638 391 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 HOMER3Q9NSC5 361 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 TSPAN16Q9UKR8 245 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 ARL5CA6NH57 179 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 PAMP19021 973 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 CDC25CP30307 473 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 ADIGQ0VDE8 80 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 TMC5Q6UXY8 1006 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 ECHDC2Q86YB7 292 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 DHX40Q8IX18 779 aaKnown RBP9.9□□□□□ -0.82
NEK1-203ENST00000507142 SPDYE1Q8NFV5 336 aaPredicted RBP9.9□□□□□ -0.82
NEK1-203ENST00000507142 PBXIP1Q96AQ6 731 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 CINPQ9BW66 212 aaPredicted RBP9.9□□□□□ -0.82
NEK1-203ENST00000507142 ALG13Q9NP73 1137 aaKnown RBP9.9□□□□□ -0.82
NEK1-203ENST00000507142 CDH9Q9ULB4 789 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 NCKAP1Q9Y2A7 1128 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 NRAPQ86VF7 1730 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 XIRP1Q702N8 1843 aaKnown RBP9.9□□□□□ -0.82
NEK1-203ENST00000507142 MYADML2A6NDP7 307 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 LZTS3O60299 673 aaPredicted RBP9.9□□□□□ -0.82
NEK1-203ENST00000507142 NDUFS2O75306 463 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 ZMYND10O75800 440 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 KIAA0754O94854 1291 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 F9P00740 461 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 ATP5DP30049 168 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 PBX3P40426 434 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 PDE1BQ01064 536 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 DUSP4Q13115 394 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 HECTD3Q5T447 861 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 GPR158Q5T848 1215 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 CDKL3Q8IVW4 592 aaPredicted RBP9.9□□□□□ -0.82
NEK1-203ENST00000507142 CEP120Q8N960 986 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 BPIFA3Q9BQP9 254 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 DCLK3Q9C098 648 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 ABHD10Q9NUJ1 306 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 NKIRAS1Q9NYS0 192 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 NUDT5Q9UKK9 219 aa9.9□□□□□ -0.82
NEK1-203ENST00000507142 SMIM28A0A1B0GU29 152 aa9.9□□□□□ -0.83
NEK1-203ENST00000507142 F2P00734 622 aa9.9□□□□□ -0.83
NEK1-203ENST00000507142 CAPN2P17655 700 aa9.9□□□□□ -0.83
NEK1-203ENST00000507142 CXCR5P32302 372 aa9.9□□□□□ -0.83
NEK1-203ENST00000507142 KLHDC7AQ5VTJ3 777 aa9.9□□□□□ -0.83
NEK1-203ENST00000507142 KCNT2Q6UVM3 1135 aa9.9□□□□□ -0.83
NEK1-203ENST00000507142 MAMDC4Q6UXC1 1216 aa9.9□□□□□ -0.83
NEK1-203ENST00000507142 GPR152Q8TDT2 470 aa9.9□□□□□ -0.83
NEK1-203ENST00000507142 ING5Q8WYH8 240 aa9.9□□□□□ -0.83
NEK1-203ENST00000507142 ATP6V1E2Q96A05 226 aa9.9□□□□□ -0.83
NEK1-203ENST00000507142 C18orf25Q96B23 403 aaPredicted RBP9.9□□□□□ -0.83
NEK1-203ENST00000507142 MCRS1Q96EZ8 462 aa9.9□□□□□ -0.83
NEK1-203ENST00000507142 MAGEB5Q9BZ81 275 aa9.9□□□□□ -0.83
NEK1-203ENST00000507142 ARHGAP42A6NI28 874 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 CNMDO75829 334 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 PCDH8O95206 1070 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 ATP5C1P36542 298 aaKnown RBP9.89□□□□□ -0.83
NEK1-203ENST00000507142 NRIP1P48552 1158 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 RABGGTBP53611 331 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 GTF2BQ00403 316 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 ZC3H18Q86VM9 953 aaKnown RBP9.89□□□□□ -0.83
NEK1-203ENST00000507142 TSC1Q92574 1164 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 TATDN2Q93075 761 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 TMA16Q96EY4 203 aaKnown RBP9.89□□□□□ -0.83
NEK1-203ENST00000507142 PANX2Q96RD6 677 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 TRIM56Q9BRZ2 755 aaKnown RBP9.89□□□□□ -0.83
NEK1-203ENST00000507142 SEMA6BQ9H3T3 888 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 SARS2Q9NP81 518 aaKnown RBP9.89□□□□□ -0.83
NEK1-203ENST00000507142 LIMA1Q9UHB6 759 aaKnown RBP9.89□□□□□ -0.83
NEK1-203ENST00000507142 NUP98P52948 1817 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 SLX4Q8IY92 1834 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 IGLV3-22A0A075B6J6 115 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 LRRIQ3A6PVS8 624 aaPredicted RBP9.89□□□□□ -0.83
NEK1-203ENST00000507142 PPP1R3GB7ZBB8 358 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 PGRMC1O00264 195 aaKnown RBP9.89□□□□□ -0.83
NEK1-203ENST00000507142 FGF19O95750 216 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 OXCT1P55809 520 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 DDR2Q16832 855 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 TIGD5Q53EQ6 642 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 TAPT1Q6NXT6 567 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 PDZD8Q8NEN9 1154 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 MYLPFQ96A32 169 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 SKA1Q96BD8 255 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 FAM107BQ9H098 131 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 PRDM10Q9NQV6 1147 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 A0A1W2PQC6 194 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 KIAA1324Q6UXG2 1013 aaKnown RBP9.89□□□□□ -0.83
NEK1-203ENST00000507142 C17orf53Q8N3J3 647 aaPredicted RBP9.89□□□□□ -0.83
NEK1-203ENST00000507142 MAB21L3Q8N8X9 362 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 MTMR8Q96EF0 704 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 ARFGAP3Q9NP61 516 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 C2CD2Q9Y426 696 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 GOLGA6L7A0A1B0GV03 622 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 MAPK13O15264 365 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 OPA1O60313 960 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 RPL17P18621 184 aaKnown RBP9.89□□□□□ -0.83
NEK1-203ENST00000507142 MX2P20592 715 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 KCNA1Q09470 495 aa9.89□□□□□ -0.83
NEK1-203ENST00000507142 PIGHQ14442 188 aaPredicted RBP9.89□□□□□ -0.83
NEK1-203ENST00000507142 SUSD6Q92537 303 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms