RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 TMEFF1Q8IYR6 380 aa9.7□□□□□ -0.86
COPS4-204ENST00000506443 CCDC33Q8N5R6 958 aa9.7□□□□□ -0.86
COPS4-204ENST00000506443 CAMKK1Q8N5S9 505 aa9.7□□□□□ -0.86
COPS4-204ENST00000506443 MAB21L3Q8N8X9 362 aa9.7□□□□□ -0.86
COPS4-204ENST00000506443 TMEM161BQ8NDZ6 487 aa9.7□□□□□ -0.86
COPS4-204ENST00000506443 HNRNPLLQ8WVV9 542 aaKnown RBP9.7□□□□□ -0.86
COPS4-204ENST00000506443 SPIRE2Q8WWL2 714 aa9.7□□□□□ -0.86
COPS4-204ENST00000506443 FNBP1Q96RU3 617 aa9.7□□□□□ -0.86
COPS4-204ENST00000506443 TASP1Q9H6P5 420 aa9.7□□□□□ -0.86
COPS4-204ENST00000506443 PP2D1A8MPX8 630 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 CLDN3O15551 220 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 HCRTO43612 131 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 FGF19O95750 216 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 CLTAP09496 248 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 MAPTP10636 758 aaKnown RBP9.69□□□□□ -0.86
COPS4-204ENST00000506443 ENGP17813 658 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 TYMPP19971 482 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 CDC25AP30304 524 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 TOB1P50616 345 aaPredicted RBP9.69□□□□□ -0.86
COPS4-204ENST00000506443 LILRA4P59901 499 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 TRIM29Q14134 588 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 NBR1Q14596 966 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 NOLC1Q14978 699 aaKnown RBP eCLIP9.69□□□□□ -0.86
COPS4-204ENST00000506443 GAB4Q2WGN9 574 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 SLC39A12Q504Y0 691 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 C2orf27AQ580R0 203 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 TTC38Q5R3I4 469 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 OVOS1Q6IE37 1185 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 TENM4Q6N022 2769 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 HAUS6Q7Z4H7 955 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 LRRTM3Q86VH5 581 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 CMTM8Q8IZV2 173 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 PNPLA1Q8N8W4 532 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 TSTD1Q8NFU3 115 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 DRC1Q96MC2 740 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 P2RY13Q9BPV8 354 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 MMTAG2Q9BU76 263 aaKnown RBP9.69□□□□□ -0.86
COPS4-204ENST00000506443 FOXP1Q9H334 677 aaPredicted RBP9.69□□□□□ -0.86
COPS4-204ENST00000506443 CD93Q9NPY3 652 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 TMLHEQ9NVH6 421 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 TBX20Q9UMR3 447 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 DNM3Q9UQ16 869 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 RAXQ9Y2V3 346 aa9.69□□□□□ -0.86
COPS4-204ENST00000506443 LACTBL1A8MY62 500 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 PIRO00625 290 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 EIF5BO60841 1220 aaKnown RBP9.68□□□□□ -0.86
COPS4-204ENST00000506443 ATG13O75143 517 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 C1QL1O75973 258 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 F11P03951 625 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 HMGA1P17096 107 aaKnown RBP9.68□□□□□ -0.86
COPS4-204ENST00000506443 GUCY2CP25092 1073 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 TUFMP49411 452 aaKnown RBP9.68□□□□□ -0.86
COPS4-204ENST00000506443 RAD51AP2Q09MP3 1159 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 ENOX2Q16206 610 aaKnown RBP9.68□□□□□ -0.86
COPS4-204ENST00000506443 MGAT5BQ3V5L5 792 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 SPATA1Q5VX52 437 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 DSTYKQ6XUX3 929 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 SYT13Q7L8C5 426 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 USP37Q86T82 979 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 ITIH5Q86UX2 942 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 FBXO18Q8NFZ0 1043 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 SNX29Q8TEQ0 813 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 KCNN1Q92952 543 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 SENP8Q96LD8 212 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 GTPBP2Q9BX10 602 aaKnown RBP9.68□□□□□ -0.86
COPS4-204ENST00000506443 THG1LQ9NWX6 298 aaKnown RBP9.68□□□□□ -0.86
COPS4-204ENST00000506443 UBQLN1Q9UMX0 589 aaKnown RBP9.68□□□□□ -0.86
COPS4-204ENST00000506443 NAV2Q8IVL1 2488 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 KNL1Q8NG31 2342 aa9.68□□□□□ -0.86
COPS4-204ENST00000506443 MUC22E2RYF6 1773 aaPredicted RBP9.68□□□□□ -0.86
COPS4-204ENST00000506443 KALRNO60229 2985 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 CFAP46Q8IYW2 2715 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 ANO9A1A5B4 782 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 RHOBTB1O94844 696 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 CYP11A1P05108 521 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 CFIP05156 583 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 NFICP08651 508 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 PLS3P13797 630 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 ITPKAP23677 461 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 OPRD1P41143 372 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 TRAPPC10P48553 1259 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 NLRP12P59046 1061 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 USP4Q13107 963 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 SEMA3BQ13214 749 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 KARSQ15046 597 aaKnown RBP9.67□□□□□ -0.86
COPS4-204ENST00000506443 SAFBQ15424 915 aaKnown RBP eCLIP9.67□□□□□ -0.86
COPS4-204ENST00000506443 ZNF77Q15935 545 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 ARHGAP15Q53QZ3 475 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 ARSHQ5FYA8 562 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 ARMCX5Q6P1M9 558 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 RAB44Q7Z6P3 723 aaPredicted RBP9.67□□□□□ -0.86
COPS4-204ENST00000506443 RASSF3Q86WH2 238 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 C12orf40Q86WS4 652 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 USP33Q8TEY7 942 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 LRIG1Q96JA1 1093 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 TSPAN18Q96SJ8 248 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 CYP2S1Q96SQ9 504 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 ZCWPW1Q9H0M4 648 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 LINC00597Q9H2U6 94 aa9.67□□□□□ -0.86
COPS4-204ENST00000506443 ECT2Q9H8V3 914 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms