RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 PPP2R2AP63151 447 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 PRKCEQ02156 737 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 TBL3Q12788 808 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 TAF11Q15544 211 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 TGFBIQ15582 683 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SLC15A2Q16348 729 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 LRRC24Q50LG9 513 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CAVIN4Q5BKX8 364 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 MSL1Q68DK7 614 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 HDXQ7Z353 690 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 MILR1Q7Z6M3 343 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 PIGWQ7Z7B1 504 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SPATA24Q86W54 205 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 THNSL2Q86YJ6 484 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 RHOT2Q8IXI1 618 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ZBED8Q8IZ13 594 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SLC38A6Q8IZM9 456 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 OXR1Q8N573 874 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ZNF713Q8N859 430 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SLC7A14Q8TBB6 771 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 PANK1Q8TE04 598 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ZNF653Q96CK0 615 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 LTV1Q96GA3 475 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 RBM14Q96PK6 669 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SECISBP2Q96T21 854 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 EIF2AQ9BY44 585 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 TM6SF1Q9BZW5 370 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SMG9Q9H0W8 520 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SCUBE2Q9NQ36 999 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 RMND1Q9NWS8 449 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CEP72Q9P209 647 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 PRKAG3Q9UGI9 489 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ACOT9Q9Y305 439 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 MGAMO43451 1857 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 GOLGA6L10A0A0M3HER8 536 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 H0YGN5 161 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 PI15O43692 258 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 LILRA1O75019 489 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 PAPLNO95428 1278 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CYP3A4P08684 503 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CCNB1P14635 433 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CYP3A5P20815 502 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 GNA11P29992 359 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 MAN2A2P49641 1150 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 THOP1P52888 689 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SRSF2Q01130 221 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 KIF23Q02241 960 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 GRIN1Q05586 938 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 RNASELQ05823 741 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 MCL1Q07820 350 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SERINC3Q13530 473 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 TUBB2AQ13885 445 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SEC23AQ15436 765 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 NKG7Q16617 165 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 PTGISQ16647 500 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 BBS9Q3SYG4 887 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SPATA1Q5VX52 437 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 DUPD1Q68J44 220 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 TWF2Q6IBS0 349 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 DHX40Q8IX18 779 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 OLIG1Q8TAK6 271 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 VMP1Q96GC9 406 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 VRK1Q99986 396 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 TUBB2BQ9BVA1 445 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 DSCC1Q9BVC3 393 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SP110Q9HB58 689 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 PRDM11Q9NQV5 511 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SUCLA2Q9P2R7 463 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SERPINB13Q9UIV8 391 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 POLR3KQ9Y2Y1 108 aaPredicted RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 NFS1Q9Y697 457 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CAPN7Q9Y6W3 813 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 BTBD18B2RXH4 712 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 DXOO77932 396 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ITGB1P05556 798 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SCG2P13521 617 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 PRKCIP41743 596 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 MATR3P43243 847 aaKnown RBP eCLIP2.41□□□□□ -2.028e-6■■■□□ 17.4
NEDD4-205ENST00000506154 ST13P50502 369 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 COPAP53621 1224 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 PDE1AP54750 535 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ANTXR2P58335 489 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 GPX6P59796 221 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 VSNL1P62760 191 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 PDE1BQ01064 536 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SCARF1Q14162 830 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SLC45A4Q5BKX6 768 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ANKRD20A2Q5SQ80 823 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ANKRD20A1Q5TYW2 823 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 ANKRD20A3Q5VUR7 823 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CCDC129Q6ZRS4 1044 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CHD1LQ86WJ1 897 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CEP57L1Q8IYX8 460 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 CERS5Q8N5B7 392 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 NSUN6Q8TEA1 469 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 AGAP11Q8TF27 550 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SETD7Q8WTS6 366 aaKnown RBP2.41□□□□□ -2.02
NEDD4-205ENST00000506154 TRIB2Q92519 343 aa2.41□□□□□ -2.02
NEDD4-205ENST00000506154 SLC47A1Q96FL8 570 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms