RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 MYL7Q01449 175 aa12.21□□□□□ -0.45
SIL1-208ENST00000505945 GRSF1Q12849 480 aaKnown RBP eCLIP12.21□□□□□ -0.45
SIL1-208ENST00000505945 CSRP2Q16527 193 aa12.21□□□□□ -0.45
SIL1-208ENST00000505945 SOWAHAQ2M3V2 549 aa12.21□□□□□ -0.45
SIL1-208ENST00000505945 TMEM196Q5HYL7 178 aa12.21□□□□□ -0.45
SIL1-208ENST00000505945 INTS6LQ5JSJ4 861 aaKnown RBP12.21□□□□□ -0.45
SIL1-208ENST00000505945 LMBRD2Q68DH5 695 aaPredicted RBP12.21□□□□□ -0.45
SIL1-208ENST00000505945 NAIF1Q69YI7 327 aaPredicted RBP12.21□□□□□ -0.45
SIL1-208ENST00000505945 CC2D1AQ6P1N0 951 aaPredicted RBP12.21□□□□□ -0.45
SIL1-208ENST00000505945 WDR5BQ86VZ2 330 aa12.21□□□□□ -0.45
SIL1-208ENST00000505945 OSTM1Q86WC4 334 aa12.21□□□□□ -0.45
SIL1-208ENST00000505945 PDILTQ8N807 584 aa12.21□□□□□ -0.45
SIL1-208ENST00000505945 TTC16Q8NEE8 873 aa12.21□□□□□ -0.45
SIL1-208ENST00000505945 LEO1Q8WVC0 666 aaPredicted RBP12.21□□□□□ -0.45
SIL1-208ENST00000505945 USP28Q96RU2 1077 aa12.21□□□□□ -0.45
SIL1-208ENST00000505945 MTMR12Q9C0I1 747 aa12.21□□□□□ -0.45
SIL1-208ENST00000505945 KIF9Q9HAQ2 790 aa12.21□□□□□ -0.45
SIL1-208ENST00000505945 ABCB6Q9NP58 842 aa12.21□□□□□ -0.45
SIL1-208ENST00000505945 POLR3BQ9NW08 1133 aaPredicted RBP12.21□□□□□ -0.45
SIL1-208ENST00000505945 GDAP2Q9NXN4 497 aa12.21□□□□□ -0.45
SIL1-208ENST00000505945 ITGA11Q9UKX5 1188 aa12.21□□□□□ -0.45
SIL1-208ENST00000505945 CNOT1A5YKK6 2376 aaKnown RBP12.21□□□□□ -0.46
SIL1-208ENST00000505945 PTPRJQ12913 1337 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 SOBPA7XYQ1 873 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 TRDMT1O14717 391 aaKnown RBP12.2□□□□□ -0.46
SIL1-208ENST00000505945 GABRDO14764 452 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 AXIN1O15169 862 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 GDF9O60383 454 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 ATP2C2O75185 946 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 TADA3O75528 432 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 NOL4O94818 638 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 EGFP01133 1207 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 TMEM191BP0C7N4 346 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 GALK1P51570 392 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 ALCAMQ13740 583 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 SLC39A14Q15043 492 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 PRR23CQ6ZRP0 262 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 SPATA2LQ8IUW3 424 aaPredicted RBP12.2□□□□□ -0.46
SIL1-208ENST00000505945 SCN4BQ8IWT1 228 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 ADGRF2Q8IZF7 708 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 GPD1LQ8N335 351 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 TOP6BLQ8N6T0 577 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 GLIS3Q8NEA6 775 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 OR5B17Q8NGF7 314 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 HPS3Q969F9 1004 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 TRMT2BQ96GJ1 504 aaKnown RBP12.2□□□□□ -0.46
SIL1-208ENST00000505945 MYRFLQ96LU7 910 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 CNTNAP3BQ96NU0 1288 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 SLC22A12Q96S37 553 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 CNTNAP3Q9BZ76 1288 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 TMEM206Q9H813 350 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 TRPC7Q9HCX4 862 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 FOXD4L1Q9NU39 408 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 INTS13Q9NVM9 706 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 UXTQ9UBK9 157 aaPredicted RBP12.2□□□□□ -0.46
SIL1-208ENST00000505945 MTMR6Q9Y217 621 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 OBSL1O75147 1896 aa12.2□□□□□ -0.46
SIL1-208ENST00000505945 CACNA1BQ00975 2339 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 CHD8Q9HCK8 2581 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 ZNF233A6NK53 670 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 SLC30A4O14863 429 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 ATG13O75143 517 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 RNF40O75150 1001 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 LMO2P25791 158 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 PCSK1P29120 753 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 GJA4P35212 333 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 LHX1P48742 406 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 AMPD2Q01433 879 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 ZNF268Q14587 947 aaPredicted RBP12.19□□□□□ -0.46
SIL1-208ENST00000505945 MTF1Q14872 753 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 PDGFRLQ15198 375 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 CFAP221Q4G0U5 840 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 FAM171BQ6P995 826 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 CCDC65Q8IXS2 484 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 NETO1Q8TDF5 533 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 HPDLQ96IR7 371 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 ANKRD36BP1Q96IX9 119 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 ECT2Q9H8V3 914 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 DUS2Q9NX74 493 aaKnown RBP12.19□□□□□ -0.46
SIL1-208ENST00000505945 SLC8A2Q9UPR5 921 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 R3HCC1Q9Y3T6 440 aaKnown RBP12.19□□□□□ -0.46
SIL1-208ENST00000505945 WNT6Q9Y6F9 365 aa12.19□□□□□ -0.46
SIL1-208ENST00000505945 TRAV19A0A0A6YYK7 116 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 RPP40O75818 363 aaKnown RBP12.18□□□□□ -0.46
SIL1-208ENST00000505945 TNNC2P02585 160 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 CKMP06732 381 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 PDGFRBP09619 1106 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 USP17L7P0C7H9 530 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 HOXD13P35453 343 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 PSMC1P62191 440 aaKnown RBP12.18□□□□□ -0.46
SIL1-208ENST00000505945 FAM160A1Q05DH4 1040 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 MYO1EQ12965 1108 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 CCDC6Q16204 474 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 DUOXA2Q1HG44 320 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 DPH6Q7L8W6 267 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 CACNA2D4Q7Z3S7 1137 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 KBTBD6Q86V97 674 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 CBWD2Q8IUF1 395 aa12.18□□□□□ -0.46
SIL1-208ENST00000505945 ARL14EPQ8N8R7 260 aaPredicted RBP12.18□□□□□ -0.46
SIL1-208ENST00000505945 SPATA18Q8TC71 538 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms