RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 IFIT2P09913 472 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 SRGNP10124 158 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 TXNP10599 105 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 IL1R1P14778 569 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 KLRC1P26715 233 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 LRPAP1P30533 357 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 TM4SF4P48230 202 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 ZXDAP98168 799 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 SATB1Q01826 763 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 SP2Q02086 613 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 ABHD18Q0P651 414 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 MYO1EQ12965 1108 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 MGAT5BQ3V5L5 792 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 ARHGAP40Q5TG30 622 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 VWA1Q6PCB0 445 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 KCTD20Q7Z5Y7 419 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 SKAP1Q86WV1 359 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 FAM109AQ8N4B1 249 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 CCDC33Q8N5R6 958 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 ATP11CQ8NB49 1132 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 B3GALNT2Q8NCR0 500 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 TOR1AIP2Q8NFQ8 470 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 PPP2R3CQ969Q6 453 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 FAM136AQ96C01 138 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 CCDC138Q96M89 665 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 MYD88Q99836 296 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 ELAC2Q9BQ52 826 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 AIFM2Q9BRQ8 373 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 ACTRT3Q9BYD9 372 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 CYP4F11Q9HBI6 524 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 XPNPEP3Q9NQH7 507 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 GJB4Q9NTQ9 266 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 NDRG4Q9ULP0 352 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 SSX2IPQ9Y2D8 614 aa4.92□□□□□ -1.62
TOPBP1-204ENST00000505804 H7C4K7 107 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 RAB27BO00194 218 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 PPM1DO15297 605 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 YY2O15391 372 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 NCK2O43639 380 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 ANXA2P07355 339 aaKnown RBP4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 PDHA1P08559 390 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 TSHRP16473 764 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 BTF3P20290 206 aaKnown RBP4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 TNFSF4P23510 183 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 CARSP49589 748 aaKnown RBP4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 DGKEP52429 567 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 E2F2Q14209 437 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 SLC29A2Q14542 456 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 FAM209BQ5JX69 171 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 RRAGBQ5VZM2 374 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 ICE2Q659A1 982 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 SFRP4Q6FHJ7 346 aaPredicted RBP4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 RGS7BPQ6MZT1 257 aaPredicted RBP4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 RNF44Q7L0R7 432 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 DPP9Q86TI2 863 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 FAM186BQ8IYM0 893 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 ULK2Q8IYT8 1036 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 SLC44A3Q8N4M1 653 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 RNF152Q8N8N0 203 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 MYCBPAPQ8TBZ2 947 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 BPIFB1Q8TDL5 484 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 SLC39A13Q96H72 371 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 RIPOR3Q96MK2 946 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 PPP1R9BQ96SB3 815 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 ZNF700Q9H0M5 742 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 CXorf36Q9H7Y0 433 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 SYBUQ9NX95 663 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 KCTD5Q9NXV2 234 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 MID2Q9UJV3 735 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 SERTAD3Q9UJW9 196 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 DMTF1Q9Y222 760 aa4.91□□□□□ -1.62
TOPBP1-204ENST00000505804 LOC102723971A0A1B0GUV8 181 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 RASA4BC9J798 803 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 RASA4O43374 803 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 PEX1O43933 1283 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 FSHBP01225 129 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 ERBB2P04626 1255 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 HKR1P10072 659 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 KCNA3P22001 575 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 RHBDL3P58872 404 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 NPY5RQ15761 445 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 PTCHD3Q3KNS1 767 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 HIBCHQ6NVY1 386 aaPredicted RBP4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 Q6YL49 198 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 Q6ZNX1 250 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 Q6ZPA2 131 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 YAF2Q8IY57 180 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 SDR16C5Q8N3Y7 309 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 CAVIN3Q969G5 261 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 FBXL20Q96IG2 436 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 MPHOSPH6Q99547 160 aaKnown RBP4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 AS3MTQ9HBK9 375 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 SERHLQ9NQF3 203 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 STARD7Q9NQZ5 370 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 EPN1Q9Y6I3 576 aaPredicted RBP4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 FER1L4A9Z1Z3 1794 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 MAST3O60307 1309 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 SALL3Q9BXA9 1300 aa4.9□□□□□ -1.63
TOPBP1-204ENST00000505804 VWC2LB2RUY7 222 aa4.89□□□□□ -1.63
TOPBP1-204ENST00000505804 APOL1O14791 398 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms