RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 KIAA0895LQ68EN5 471 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 TRIM43Q96BQ3 446 aaPredicted RBP4.82□□□□□ -1.64
CHD1-203ENST00000505657 FAM136AQ96C01 138 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 FBXL20Q96IG2 436 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 TPSD1Q9BZJ3 242 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 LRRC27Q9C0I9 530 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 MS4A7Q9GZW8 240 aaPredicted RBP4.82□□□□□ -1.64
CHD1-203ENST00000505657 FOXJ2Q9P0K8 574 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 DKK3Q9UBP4 350 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 SERTAD3Q9UJW9 196 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 SSX2IPQ9Y2D8 614 aa4.82□□□□□ -1.64
CHD1-203ENST00000505657 WDR27A2RRH5 827 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 ISM1B1AKI9 464 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 F8W8V4 182 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 KIF3BO15066 747 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 MGEA5O60502 916 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 PQBP1O60828 265 aaKnown RBP4.81□□□□□ -1.64
CHD1-203ENST00000505657 FOLR3P41439 243 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 PXNP49023 591 aaPredicted RBP4.81□□□□□ -1.64
CHD1-203ENST00000505657 MAPK10P53779 464 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 TBX4P57082 545 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 MRPS35P82673 323 aaKnown RBP4.81□□□□□ -1.64
CHD1-203ENST00000505657 COBLL1Q53SF7 1204 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 RGS7BPQ6MZT1 257 aaPredicted RBP4.81□□□□□ -1.64
CHD1-203ENST00000505657 LAYNQ6UX15 382 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 PEG10Q86TG7 708 aaKnown RBP4.81□□□□□ -1.64
CHD1-203ENST00000505657 ACTRT2Q8TDY3 377 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 TTC17Q96AE7 1141 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 NMD3Q96D46 503 aaKnown RBP4.81□□□□□ -1.64
CHD1-203ENST00000505657 PTDSS2Q9BVG9 487 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 SARGQ9BW04 601 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 ZNF518BQ9C0D4 1074 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 PRDM13Q9H4Q3 707 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 CXorf36Q9H7Y0 433 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 SYNPO2LQ9H987 977 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 KIAA1586Q9HCI6 787 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 AFF4Q9UHB7 1163 aaKnown RBP4.81□□□□□ -1.64
CHD1-203ENST00000505657 OGDHLQ9ULD0 1010 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 NDRG4Q9ULP0 352 aaKnown RBP4.81□□□□□ -1.64
CHD1-203ENST00000505657 CORO2BQ9UQ03 480 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 DMTF1Q9Y222 760 aa4.81□□□□□ -1.64
CHD1-203ENST00000505657 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.81□□□□□ -1.64
CHD1-203ENST00000505657 PYCARD-AS1I3L0S3 204 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 MYO1CO00159 1063 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 CSF1RP07333 972 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 IL1R1P14778 569 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 ZKSCAN1P17029 563 aaPredicted RBP4.8□□□□□ -1.64
CHD1-203ENST00000505657 PCSK6P29122 969 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 WNT3P56703 355 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 SIM1P81133 766 aaPredicted RBP4.8□□□□□ -1.64
CHD1-203ENST00000505657 ITIH3Q06033 890 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 MYO1EQ12965 1108 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 RAB32Q13637 225 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 ZNF169Q14929 603 aaPredicted RBP4.8□□□□□ -1.64
CHD1-203ENST00000505657 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 PLA1AQ53H76 456 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 OLFML1Q6UWY5 402 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 MAVSQ7Z434 540 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 GAS2L3Q86XJ1 694 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 SUCLG2Q96I99 432 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 PGBD1Q96JS3 809 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 PDLIM2Q96JY6 352 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 ZNF287Q9HBT7 754 aa4.8□□□□□ -1.64
CHD1-203ENST00000505657 MBD3L4A6NDZ8 208 aaPredicted RBP4.79□□□□□ -1.64
CHD1-203ENST00000505657 MBD3L3A6NE82 208 aaPredicted RBP4.79□□□□□ -1.64
CHD1-203ENST00000505657 PMM2O15305 246 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 MPPED1O15442 326 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 TRIM27P14373 513 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 ADORA2AP29274 412 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 PPIFP30405 207 aaKnown RBP4.79□□□□□ -1.64
CHD1-203ENST00000505657 PIK3CBP42338 1070 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 CLK3P49761 638 aaKnown RBP4.79□□□□□ -1.64
CHD1-203ENST00000505657 CLCN2P51788 898 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 NXPH1P58417 271 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 PTPRRQ15256 657 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 KSR2Q6VAB6 950 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 KCTD20Q7Z5Y7 419 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 DNAJC10Q8IXB1 793 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 KRT78Q8N1N4 520 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 ATG4AQ8WYN0 398 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 RFKQ969G6 155 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 FKBP10Q96AY3 582 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 MOGAT1Q96PD6 335 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 STK31Q9BXU1 1019 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 BTBD1Q9H0C5 482 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 AS3MTQ9HBK9 375 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 A1CFQ9NQ94 594 aaKnown RBP4.79□□□□□ -1.64
CHD1-203ENST00000505657 KLC4Q9NSK0 619 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 LRIT1Q9P2V4 623 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 SHOC2Q9UQ13 582 aa4.79□□□□□ -1.64
CHD1-203ENST00000505657 LINC00473A8K010 186 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 KPNA5O15131 536 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 PRC1O43663 620 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 LMNAP02545 664 aaKnown RBP4.78□□□□□ -1.64
CHD1-203ENST00000505657 MYL3P08590 195 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 CYP2C9P11712 490 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 KCNA3P22001 575 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 KLRC1P26715 233 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 CXCR5P32302 372 aa4.78□□□□□ -1.64
CHD1-203ENST00000505657 LIPAP38571 399 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms