RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 HHIPQ96QV1 700 aa6.31□□□□□ -1.4
GYPB-205ENST00000505583 TSPAN18Q96SJ8 248 aa6.31□□□□□ -1.4
GYPB-205ENST00000505583 CYP2S1Q96SQ9 504 aa6.31□□□□□ -1.4
GYPB-205ENST00000505583 PKMYT1Q99640 499 aa6.31□□□□□ -1.4
GYPB-205ENST00000505583 PI4K2AQ9BTU6 479 aa6.31□□□□□ -1.4
GYPB-205ENST00000505583 STRA6Q9BX79 667 aa6.31□□□□□ -1.4
GYPB-205ENST00000505583 CCSER1Q9C0I3 900 aa6.31□□□□□ -1.4
GYPB-205ENST00000505583 ASB7Q9H672 318 aa6.31□□□□□ -1.4
GYPB-205ENST00000505583 TBC1D7Q9P0N9 293 aa6.31□□□□□ -1.4
GYPB-205ENST00000505583 AGO2Q9UKV8 859 aaKnown RBP6.31□□□□□ -1.4
GYPB-205ENST00000505583 L1RE1Q9UN81 338 aa6.31□□□□□ -1.4
GYPB-205ENST00000505583 MAGED2Q9UNF1 606 aaPredicted RBP6.31□□□□□ -1.4
GYPB-205ENST00000505583 DERAQ9Y315 318 aa6.31□□□□□ -1.4
GYPB-205ENST00000505583 SDK1Q7Z5N4 2213 aa6.31□□□□□ -1.4
GYPB-205ENST00000505583 MAP1BP46821 2468 aaKnown RBP6.31□□□□□ -1.4
GYPB-205ENST00000505583 PTPRJQ12913 1337 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 NUP205Q92621 2012 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 CACNA1BQ00975 2339 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 GOLGA8IPA6NC78 632 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 MYMKA6NI61 221 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 GOLGA8JA6NMD2 632 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 TRDMT1O14717 391 aaKnown RBP6.3□□□□□ -1.4
GYPB-205ENST00000505583 ATP2C2O75185 946 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 TBCAO75347 108 aaKnown RBP6.3□□□□□ -1.4
GYPB-205ENST00000505583 PRPF40AO75400 957 aaKnown RBP6.3□□□□□ -1.4
GYPB-205ENST00000505583 RPP40O75818 363 aaKnown RBP6.3□□□□□ -1.4
GYPB-205ENST00000505583 FGF19O95750 216 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 ITGB3P05106 788 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 POLR2BP30876 1174 aaKnown RBP6.3□□□□□ -1.4
GYPB-205ENST00000505583 GJA4P35212 333 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 DDIT3P35638 169 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 ZXDBP98169 803 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 TFAMQ00059 246 aaKnown RBP6.3□□□□□ -1.4
GYPB-205ENST00000505583 VEPH1Q14D04 833 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 PTPAQ15257 358 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 RABEP1Q15276 862 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 TAF12Q16514 161 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 PLA2G2CQ5R387 149 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 N4BP2L1Q5TBK1 243 aaPredicted RBP6.3□□□□□ -1.4
GYPB-205ENST00000505583 FAM173BQ6P4H8 233 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 C1orf228Q6PIY5 440 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 MON1AQ86VX9 555 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 METTL23Q86XA0 190 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 THEM5Q8N1Q8 247 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 SYNPOQ8N3V7 929 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 C1orf127Q8N9H9 656 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 TTC16Q8NEE8 873 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 SPPL2BQ8TCT7 592 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 POMGNT1Q8WZA1 660 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 LARP4BQ92615 738 aaKnown RBP6.3□□□□□ -1.4
GYPB-205ENST00000505583 DNAJC19Q96DA6 116 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 CLIC6Q96NY7 704 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 FAM213AQ9BRX8 229 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 ST6GALNAC4Q9H4F1 302 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 TDP1Q9NUW8 608 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 DDX43Q9NXZ2 648 aaKnown RBP6.3□□□□□ -1.4
GYPB-205ENST00000505583 SIX4Q9UIU6 781 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 RALYQ9UKM9 306 aaKnown RBP6.3□□□□□ -1.4
GYPB-205ENST00000505583 GTF3C4Q9UKN8 822 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 DSEQ9UL01 958 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 AGAP1Q9UPQ3 857 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 INVSQ9Y283 1065 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 NME7Q9Y5B8 376 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 PCDHB5Q9Y5E4 795 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.3□□□□□ -1.4
GYPB-205ENST00000505583 CLIC4Q9Y696 253 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 WNT6Q9Y6F9 365 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 EPG5Q9HCE0 2579 aa6.3□□□□□ -1.4
GYPB-205ENST00000505583 TNRC6BQ9UPQ9 1833 aaKnown RBP6.29□□□□□ -1.4
GYPB-205ENST00000505583 A0A087X0B3 334 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 C2orf78A6NCI8 922 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 ACACBO00763 2458 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 SCAMP3O14828 347 aaKnown RBP6.29□□□□□ -1.4
GYPB-205ENST00000505583 SLC26A4O43511 780 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 EIF5BO60841 1220 aaKnown RBP6.29□□□□□ -1.4
GYPB-205ENST00000505583 NOL4O94818 638 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 EPN2O95208 641 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 ZNF806P0C7X5 589 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 HOXB1P14653 301 aaPredicted RBP6.29□□□□□ -1.4
GYPB-205ENST00000505583 SCP2P22307 547 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 PAX3P23760 479 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 LMO2P25791 158 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 LONP1P36776 959 aaKnown RBP6.29□□□□□ -1.4
GYPB-205ENST00000505583 AVPR1AP37288 418 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 PRSS12P56730 875 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 MESP2Q0VG99 397 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 GRSF1Q12849 480 aaKnown RBP eCLIP6.29□□□□□ -1.4
GYPB-205ENST00000505583 BFSP1Q12934 665 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 MTF1Q14872 753 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 ZNF77Q15935 545 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 ST3GAL2Q16842 350 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 SOWAHAQ2M3V2 549 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 GAB4Q2WGN9 574 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 SV2CQ496J9 727 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 AASDHQ4L235 1098 aaPredicted RBP6.29□□□□□ -1.4
GYPB-205ENST00000505583 INTS6LQ5JSJ4 861 aaKnown RBP6.29□□□□□ -1.4
GYPB-205ENST00000505583 STPG1Q5TH74 334 aa6.29□□□□□ -1.4
GYPB-205ENST00000505583 LARP1BQ659C4 914 aaKnown RBP6.29□□□□□ -1.4
GYPB-205ENST00000505583 LMBRD2Q68DH5 695 aaPredicted RBP6.29□□□□□ -1.4
GYPB-205ENST00000505583 SLFN12LQ6IEE8 588 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms