RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 PDHXO00330 501 aa20.54■□□□□ 0.88
SDHA-206ENST00000505555 MAGEB2O15479 319 aa20.54■□□□□ 0.88
SDHA-206ENST00000505555 VCPP55072 806 aaKnown RBP20.54■□□□□ 0.88
SDHA-206ENST00000505555 TAF5Q15542 800 aa20.54■□□□□ 0.88
SDHA-206ENST00000505555 GKAP1Q5VSY0 366 aaPredicted RBP20.54■□□□□ 0.88
SDHA-206ENST00000505555 LRRC34Q8IZ02 419 aa20.54■□□□□ 0.88
SDHA-206ENST00000505555 PPP1R13LQ8WUF5 828 aa20.54■□□□□ 0.88
SDHA-206ENST00000505555 CXCL16Q9H2A7 254 aa20.54■□□□□ 0.88
SDHA-206ENST00000505555 MLXIPLQ9NP71 852 aa20.54■□□□□ 0.88
SDHA-206ENST00000505555 SAYSD1Q9NPB0 183 aa20.54■□□□□ 0.88
SDHA-206ENST00000505555 H3BRB1 525 aa20.53■□□□□ 0.88
SDHA-206ENST00000505555 SGK1O00141 431 aa20.53■□□□□ 0.88
SDHA-206ENST00000505555 DNALI1O14645 258 aaPredicted RBP20.53■□□□□ 0.88
SDHA-206ENST00000505555 POU5F1BQ06416 359 aa20.53■□□□□ 0.88
SDHA-206ENST00000505555 TMEM132DQ14C87 1099 aa20.53■□□□□ 0.88
SDHA-206ENST00000505555 CACNA2D3Q8IZS8 1091 aa20.53■□□□□ 0.88
SDHA-206ENST00000505555 TUT1Q9H6E5 874 aaKnown RBP20.53■□□□□ 0.88
SDHA-206ENST00000505555 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.53■□□□□ 0.88
SDHA-206ENST00000505555 DRG1Q9Y295 367 aaKnown RBP20.53■□□□□ 0.88
SDHA-206ENST00000505555 SNAI1O95863 264 aaPredicted RBP20.53■□□□□ 0.88
SDHA-206ENST00000505555 PECAM1P16284 738 aaPredicted RBP20.53■□□□□ 0.88
SDHA-206ENST00000505555 PTPN7P35236 360 aa20.53■□□□□ 0.88
SDHA-206ENST00000505555 FASTKD3Q14CZ7 662 aaKnown RBP20.53■□□□□ 0.88
SDHA-206ENST00000505555 VSTM1Q6UX27 236 aa20.53■□□□□ 0.88
SDHA-206ENST00000505555 KAT2BQ92831 832 aa20.53■□□□□ 0.88
SDHA-206ENST00000505555 ASB7Q9H672 318 aa20.53■□□□□ 0.88
SDHA-206ENST00000505555 KCNK9Q9NPC2 374 aa20.53■□□□□ 0.88
SDHA-206ENST00000505555 PNMA3Q9UL41 463 aa20.53■□□□□ 0.88
SDHA-206ENST00000505555 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.53■□□□□ 0.88
SDHA-206ENST00000505555 NAALADL1Q9UQQ1 740 aa20.53■□□□□ 0.88
SDHA-206ENST00000505555 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.53■□□□□ 0.88
SDHA-206ENST00000505555 LOC102724159A0A0B4J2E5 919 aa20.52■□□□□ 0.88
SDHA-206ENST00000505555 TMEM120BA0PK00 339 aa20.52■□□□□ 0.88
SDHA-206ENST00000505555 TSPAN1O60635 241 aa20.52■□□□□ 0.88
SDHA-206ENST00000505555 CST8O60676 142 aa20.52■□□□□ 0.88
SDHA-206ENST00000505555 ADCY1Q08828 1119 aa20.52■□□□□ 0.88
SDHA-206ENST00000505555 PWP2Q15269 919 aaKnown RBP20.52■□□□□ 0.88
SDHA-206ENST00000505555 POLNQ7Z5Q5 900 aa20.52■□□□□ 0.88
SDHA-206ENST00000505555 IFNLR1Q8IU57 520 aaPredicted RBP20.52■□□□□ 0.88
SDHA-206ENST00000505555 VTA1Q9NP79 307 aa20.52■□□□□ 0.88
SDHA-206ENST00000505555 TPX2Q9ULW0 747 aaKnown RBP20.52■□□□□ 0.88
SDHA-206ENST00000505555 GINS2Q9Y248 185 aa20.52■□□□□ 0.88
SDHA-206ENST00000505555 ECM2O94769 699 aaPredicted RBP20.51■□□□□ 0.87
SDHA-206ENST00000505555 VIMP08670 466 aaKnown RBP20.51■□□□□ 0.87
SDHA-206ENST00000505555 GPD2P43304 727 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 NDST1P52848 882 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 CCNA1P78396 465 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 OTUD4Q01804 1114 aaKnown RBP20.51■□□□□ 0.87
SDHA-206ENST00000505555 TMEM62Q0P6H9 643 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 MPP2Q14168 576 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 SPRED3Q2MJR0 410 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 MARCH8Q5T0T0 291 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 SH3PXD2AQ5TCZ1 1133 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 TAB3Q8N5C8 712 aaPredicted RBP20.51■□□□□ 0.87
SDHA-206ENST00000505555 ANKRD42Q8N9B4 389 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 ACTL9Q8TC94 416 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 KATNBL1Q9H079 304 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 DPP3Q9NY33 737 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 CAPN7Q9Y6W3 813 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 GOLGA8MH3BSY2 632 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 CYP3A5P20815 502 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 KDELR1P24390 212 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 ATICP31939 592 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 GDF10P55107 478 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 ZNF268Q14587 947 aaPredicted RBP20.51■□□□□ 0.87
SDHA-206ENST00000505555 RAB6CQ53S08 254 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 CAPN12Q6ZSI9 719 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 RELL1Q8IUW5 271 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 SLC35B2Q8TB61 432 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 HSPH1Q92598 858 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 NKD2Q969F2 451 aaPredicted RBP20.51■□□□□ 0.87
SDHA-206ENST00000505555 L3MBTL3Q96JM7 780 aaPredicted RBP20.51■□□□□ 0.87
SDHA-206ENST00000505555 ACAP3Q96P50 834 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 OSBPL7Q9BZF2 842 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 RAB6CQ9H0N0 254 aa20.51■□□□□ 0.87
SDHA-206ENST00000505555 BTBD19C9JJ37 291 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 TCEA3O75764 348 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 ITGAVP06756 1048 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 KRT7P08729 469 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 MIPP30301 263 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 HADHQ16836 314 aaKnown RBP20.5■□□□□ 0.87
SDHA-206ENST00000505555 C12orf29Q8N999 325 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 KCTD6Q8NC69 237 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 CCHCR1Q8TD31 782 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 SYT17Q9BSW7 474 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 BANF1O75531 89 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 FSBPO95073 299 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 SMPD1P17405 629 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 MYO1EQ12965 1108 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 GRIK4Q16099 956 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 KIZQ2M2Z5 673 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 FAM102AQ5T9C2 384 aaPredicted RBP20.5■□□□□ 0.87
SDHA-206ENST00000505555 CCDC121Q6ZUS5 278 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 TAX1BP1Q86VP1 789 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 FNIP1Q8TF40 1166 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 DYDC1Q8WWB3 177 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 KIF12Q96FN5 646 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 VRTNQ9H8Y1 702 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 CYP3A43Q9HB55 503 aa20.5■□□□□ 0.87
SDHA-206ENST00000505555 RNF19AQ9NV58 838 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms