RNA–Protein interactions for RNA: ENST00000504872.5

APBB3-209, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-209	ENST00000504872	NXF1	Q9UBU9	619 aa	Known RBP	11.45	□□□□□ -0.58
APBB3-209	ENST00000504872	CDH9	Q9ULB4	789 aa		11.45	□□□□□ -0.58
APBB3-209	ENST00000504872	NFE2L3	Q9Y4A8	694 aa		11.45	□□□□□ -0.58
APBB3-209	ENST00000504872	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
APBB3-209	ENST00000504872	MYBPHL	A2RUH7	354 aa		11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	TULP1	O00294	542 aa	Predicted RBP	11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	AFP	P02771	609 aa	Known RBP	11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	WEE2	P0C1S8	567 aa		11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	SRGAP2B	P0DMP2	458 aa		11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	PRKCSH	P14314	528 aa	Predicted RBP	11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	PTPN1	P18031	435 aa	Known RBP	11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	PCSK1	P29120	753 aa		11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	ATXN1	P54253	815 aa	Known RBP	11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	NOP14	P78316	857 aa	Known RBP	11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	ADCY1	Q08828	1119 aa		11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	DUSP4	Q13115	394 aa		11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	IQCB1	Q15051	598 aa		11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	TCP11X2	Q5H9J9	407 aa		11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	INTS6L	Q5JSJ4	861 aa	Known RBP	11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	TMC5	Q6UXY8	1006 aa		11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	CCDC149	Q6ZUS6	474 aa		11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	PAQR9	Q6ZVX9	377 aa		11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	APTX	Q7Z2E3	356 aa	Known RBP	11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	DCP1B	Q8IZD4	617 aa	Known RBP	11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	SPPL2B	Q8TCT7	592 aa		11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	LRRC3	Q9BY71	257 aa		11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	SFXN1	Q9H9B4	322 aa		11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	AVEN	Q9NQS1	362 aa	Predicted RBP	11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	GTF3C4	Q9UKN8	822 aa		11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	USP15	Q9Y4E8	981 aa	Predicted RBP	11.44	□□□□□ -0.58
APBB3-209	ENST00000504872	GTPBP10	A4D1E9	387 aa	Known RBP	11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	SOBP	A7XYQ1	873 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	N4BP1	O75113	896 aa	Known RBP	11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	CILP	O75339	1184 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	C8A	P07357	584 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	ADRB1	P08588	477 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	PDGFRB	P09619	1106 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	HAPLN1	P10915	354 aa	Predicted RBP	11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	CPB1	P15086	417 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	ACAT1	P24752	427 aa	Known RBP	11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	EEF1G	P26641	437 aa	Known RBP	11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	PIK3CA	P42336	1068 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	ARPP19	P56211	112 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	TNNC1	P63316	161 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	MYL7	Q01449	175 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	NFE2	Q16621	373 aa	Predicted RBP	11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	MAN2A1	Q16706	1144 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	CCDC142	Q17RM4	750 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	ZSCAN23	Q3MJ62	389 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	CFAP221	Q4G0U5	840 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	SLC39A12	Q504Y0	691 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	DCAF17	Q5H9S7	520 aa	Predicted RBP	11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	ATAT1	Q5SQI0	421 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	RARS2	Q5T160	578 aa	Known RBP	11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	PHLDB3	Q6NSJ2	640 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	FAM114A1	Q8IWE2	563 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	DHX40	Q8IX18	779 aa	Known RBP	11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	SLC7A14	Q8TBB6	771 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	MYCBPAP	Q8TBZ2	947 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	LPIN3	Q9BQK8	851 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	TUBGCP2	Q9BSJ2	902 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	NIF3L1	Q9GZT8	377 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	NDST4	Q9H3R1	872 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	SMYD3	Q9H7B4	428 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	MMRN2	Q9H8L6	949 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	WDR6	Q9NNW5	1121 aa	Known RBP	11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	ABCB6	Q9NP58	842 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	CEP72	Q9P209	647 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	DNMT3B	Q9UBC3	853 aa	Known RBP	11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	CDH22	Q9UJ99	828 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	CNTN6	Q9UQ52	1028 aa		11.43	□□□□□ -0.58
APBB3-209	ENST00000504872	TSC2	P49815	1807 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	SYCE3	A1L190	88 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	KCNJ18	B7U540	433 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	P4HA1	P13674	534 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	ACO1	P21399	889 aa	Known RBP	11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	ELF1	P32519	619 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	MTHFR	P42898	656 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	MAGEA11	P43364	429 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	TUFM	P49411	452 aa	Known RBP	11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	NDST1	P52848	882 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	EPHA5	P54756	1037 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	MYL5	Q02045	173 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	KCNMA1	Q12791	1236 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	KCNJ12	Q14500	433 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	ANO6	Q4KMQ2	910 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	VWA3B	Q502W6	1294 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	WDR44	Q5JSH3	913 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	PPM1L	Q5SGD2	360 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	CES5A	Q6NT32	575 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	ELMSAN1	Q6PJG2	1045 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	POTEH	Q6S545	545 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	TTC9B	Q8N6N2	239 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	OR6B3	Q8NGW1	331 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	TWNK	Q96RR1	684 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	SYT15	Q9BQS2	421 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	IMPG2	Q9BZV3	1241 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	SNX25	Q9H3E2	840 aa		11.42	□□□□□ -0.58
APBB3-209	ENST00000504872	DPEP3	Q9H4B8	488 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms