RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 LIMS2Q7Z4I7 341 aa14.14□□□□□ -0.15
DDX41-204ENST00000504807 NELFCDQ8IXH7 590 aa14.14□□□□□ -0.15
DDX41-204ENST00000504807 CCDC65Q8IXS2 484 aa14.14□□□□□ -0.15
DDX41-204ENST00000504807 GPD1LQ8N335 351 aa14.14□□□□□ -0.15
DDX41-204ENST00000504807 ELMOD1Q8N336 334 aa14.14□□□□□ -0.15
DDX41-204ENST00000504807 TTC8Q8TAM2 541 aa14.14□□□□□ -0.15
DDX41-204ENST00000504807 PLEKHO2Q8TD55 490 aa14.14□□□□□ -0.15
DDX41-204ENST00000504807 SCFD1Q8WVM8 642 aa14.14□□□□□ -0.15
DDX41-204ENST00000504807 ZNF396Q96N95 335 aaPredicted RBP14.14□□□□□ -0.15
DDX41-204ENST00000504807 C7orf25Q9BPX7 421 aa14.14□□□□□ -0.15
DDX41-204ENST00000504807 OXCT2Q9BYC2 517 aaPredicted RBP14.14□□□□□ -0.15
DDX41-204ENST00000504807 ABI2Q9NYB9 513 aaPredicted RBP14.14□□□□□ -0.15
DDX41-204ENST00000504807 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.14□□□□□ -0.15
DDX41-204ENST00000504807 BPTFQ12830 3046 aa14.14□□□□□ -0.15
DDX41-204ENST00000504807 GIPC1O14908 333 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 CLIC2O15247 247 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 KLRC4O43908 158 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 ATP2C2O75185 946 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 PSMC3P17980 439 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 ALDH1A3P47895 512 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 NOVA1P51513 510 aaKnown RBP14.13□□□□□ -0.15
DDX41-204ENST00000504807 ASIC1P78348 528 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 GAS6Q14393 721 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 MGAT5BQ3V5L5 792 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 SV2CQ496J9 727 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 SOWAHCQ53LP3 525 aaPredicted RBP14.13□□□□□ -0.15
DDX41-204ENST00000504807 GPR158Q5T848 1215 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 HEATR6Q6AI08 1181 aaKnown RBP14.13□□□□□ -0.15
DDX41-204ENST00000504807 TXNDC11Q6PKC3 985 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 ARID3BQ8IVW6 561 aaPredicted RBP14.13□□□□□ -0.15
DDX41-204ENST00000504807 CSGALNACT2Q8N6G5 542 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 ZNF507Q8TCN5 953 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 KBTBD7Q8WVZ9 684 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 ZNF516Q92618 1163 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 DNASE1L2Q92874 299 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 GATA6Q92908 595 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 ELMO3Q96BJ8 720 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 CHFRQ96EP1 664 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 PI4K2AQ9BTU6 479 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 TRMT61BQ9BVS5 477 aaKnown RBP14.13□□□□□ -0.15
DDX41-204ENST00000504807 SLC46A2Q9BY10 475 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 ARRDC1-AS1Q9H2J1 176 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 ATXN3LQ9H3M9 355 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 BRD9Q9H8M2 597 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 AGPAT3Q9NRZ7 376 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 INTS13Q9NVM9 706 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 C2orf42Q9NWW7 574 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 HSPBP1Q9NZL4 362 aa14.13□□□□□ -0.15
DDX41-204ENST00000504807 IGSF10Q6WRI0 2623 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 OBSL1O75147 1896 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 NUP210Q8TEM1 1887 aaPredicted RBP14.12□□□□□ -0.15
DDX41-204ENST00000504807 KIF26AQ9ULI4 1882 aaPredicted RBP14.12□□□□□ -0.15
DDX41-204ENST00000504807 ACTN4O43707 911 aaKnown RBP14.12□□□□□ -0.15
DDX41-204ENST00000504807 CST3P01034 146 aaPredicted RBP14.12□□□□□ -0.15
DDX41-204ENST00000504807 CYP2F1P24903 491 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 LMO2P25791 158 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 TNK2Q07912 1038 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 ZNF252P-AS1Q0IIN9 211 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 FCHO2Q0JRZ9 810 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 ALCAMQ13740 583 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 FAM26FQ5R3K3 315 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 NT5DC4Q86YG4 428 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 MFSD6LQ8IWD5 586 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 HSCBQ8IWL3 235 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 LRRC52Q8N7C0 313 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 RDH13Q8NBN7 331 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 LEMD2Q8NC56 503 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 ZNF560Q96MR9 790 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 SMOC1Q9H4F8 434 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 SLITRK6Q9H5Y7 841 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 TMEM206Q9H813 350 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 LMAN1LQ9HAT1 526 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 GDAP2Q9NXN4 497 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 DDX43Q9NXZ2 648 aaKnown RBP14.12□□□□□ -0.15
DDX41-204ENST00000504807 HSFX1Q9UBD0 423 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 SERTAD1Q9UHV2 236 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 RCOR1Q9UKL0 485 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 GTF3C4Q9UKN8 822 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 ITGA11Q9UKX5 1188 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 DSEQ9UL01 958 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 WASF3Q9UPY6 502 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 CCL26Q9Y258 94 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 SNX9Q9Y5X1 595 aa14.12□□□□□ -0.15
DDX41-204ENST00000504807 MYBPHLA2RUH7 354 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 OTOL1A6NHN0 477 aaPredicted RBP14.11□□□□□ -0.15
DDX41-204ENST00000504807 SLC38A8A6NNN8 435 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 GABRDO14764 452 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 LDHAP00338 332 aaKnown RBP14.11□□□□□ -0.15
DDX41-204ENST00000504807 F11P03951 625 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 KRT19P08727 400 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 PAX3P23760 479 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 AFMP43652 599 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 CXCL12P48061 93 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 CASP4P49662 377 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 DDR2Q16832 855 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 INTS6LQ5JSJ4 861 aaKnown RBP14.11□□□□□ -0.15
DDX41-204ENST00000504807 UNC13DQ70J99 1090 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 METTL23Q86XA0 190 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 IQUBQ8NA54 791 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 SCNM1Q9BWG6 230 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms