RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 OCEL1Q9H607 264 aa9.02□□□□□ -0.97
CCDC149-204ENST00000504487 TMEM206Q9H813 350 aa9.02□□□□□ -0.97
CCDC149-204ENST00000504487 SOX13Q9UN79 622 aa9.02□□□□□ -0.97
CCDC149-204ENST00000504487 PHF24Q9UPV7 400 aa9.02□□□□□ -0.97
CCDC149-204ENST00000504487 LZTS1Q9Y250 596 aa9.02□□□□□ -0.97
CCDC149-204ENST00000504487 RPS6KL1Q9Y6S9 549 aa9.02□□□□□ -0.97
CCDC149-204ENST00000504487 IVNS1ABPQ9Y6Y0 642 aa9.02□□□□□ -0.97
CCDC149-204ENST00000504487 SMAPO00193 183 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 PLSCR1O15162 318 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 ETS1P14921 441 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 CYP11B1P15538 503 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 PMLP29590 882 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 RFC1P35251 1148 aaPredicted RBP9.01□□□□□ -0.97
CCDC149-204ENST00000504487 TMED10P49755 219 aaKnown RBP9.01□□□□□ -0.97
CCDC149-204ENST00000504487 C16orf72Q14CZ0 275 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 TCHHL1Q5QJ38 904 aaPredicted RBP9.01□□□□□ -0.97
CCDC149-204ENST00000504487 PPP1R18Q6NYC8 613 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 ACAD11Q709F0 780 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 ZNF554Q86TJ5 538 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 ATP2A3Q93084 1043 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 FAM136AQ96C01 138 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 FAM20AQ96MK3 541 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 CCT7Q99832 543 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 NUF2Q9BZD4 464 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 VPS11Q9H270 941 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 TSPYL2Q9H2G4 693 aaPredicted RBP9.01□□□□□ -0.97
CCDC149-204ENST00000504487 RIOX1Q9H6W3 641 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 MRPL11Q9Y3B7 192 aaKnown RBP9.01□□□□□ -0.97
CCDC149-204ENST00000504487 LMO7Q8WWI1 1683 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 DNALI1O14645 258 aaPredicted RBP9.01□□□□□ -0.97
CCDC149-204ENST00000504487 UQCRBP14927 111 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 RAG1P15918 1043 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 VCLP18206 1134 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 LSAMPQ13449 338 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 CYP1B1Q16678 543 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 ACAD10Q6JQN1 1059 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 C16orf87Q6PH81 154 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 C16orf86Q6ZW13 317 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 ZDHHC14Q8IZN3 488 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 FBXO36Q8NEA4 188 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 C7orf43Q8WVR3 580 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 ACSF2Q96CM8 615 aaPredicted RBP9.01□□□□□ -0.97
CCDC149-204ENST00000504487 MAML3Q96JK9 1138 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 ZNF577Q9BSK1 485 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 IMPG2Q9BZV3 1241 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 DEFB129Q9H1M3 183 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 SCINQ9Y6U3 715 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 EIF3DO15371 548 aaKnown RBP eCLIP9.01□□□□□ -0.97
CCDC149-204ENST00000504487 FOSP01100 380 aaPredicted RBP9.01□□□□□ -0.97
CCDC149-204ENST00000504487 ASLP04424 464 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 CCDC166P0CW27 439 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 SMARCA1P28370 1054 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 COPAP53621 1224 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 BPIFB4P59827 614 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 STX3Q13277 289 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 XKR9Q5GH70 373 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 PCGF5Q86SE9 256 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 EPS8L1Q8TE68 723 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 SREK1Q8WXA9 508 aaKnown RBP9.01□□□□□ -0.97
CCDC149-204ENST00000504487 POMGNT1Q8WZA1 660 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 THAP11Q96EK4 314 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 PCDHB18PQ96TA0 734 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 TMEM121Q9BTD3 319 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 BCAS3Q9H6U6 928 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 KRT82Q9NSB4 513 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 SEL1LQ9UBV2 794 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 DNPEPQ9ULA0 475 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 EXOC7Q9UPT5 735 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 TDRKHQ9Y2W6 561 aaKnown RBP9.01□□□□□ -0.97
CCDC149-204ENST00000504487 PCDHB4Q9Y5E5 795 aa9.01□□□□□ -0.97
CCDC149-204ENST00000504487 FRMPD4Q14CM0 1322 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 TRIM49D1C9J1S8 452 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 ZSCAN9O15535 394 aaPredicted RBP9□□□□□ -0.97
CCDC149-204ENST00000504487 TGFB1I1O43294 461 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 ZNF543Q08ER8 600 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 NFX1Q12986 1120 aaKnown RBP9□□□□□ -0.97
CCDC149-204ENST00000504487 FAM102BQ5T8I3 360 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 FOXB2Q5VYV0 432 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 RSPH3Q86UC2 560 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 EFCAB3Q8N7B9 438 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 PPWD1Q96BP3 646 aaKnown RBP9□□□□□ -0.97
CCDC149-204ENST00000504487 HAUS8Q9BT25 410 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 ARHGEF38Q9NXL2 777 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 PPM1HQ9ULR3 514 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 SH3GLB1Q9Y371 365 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 TSC22D4Q9Y3Q8 395 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 MYH1P12882 1939 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 MYH4Q9Y623 1939 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 C15orf38-AP3S2A0A0A6YYH1 394 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 H7C0C1 242 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 TRAFD1O14545 582 aaPredicted RBP9□□□□□ -0.97
CCDC149-204ENST00000504487 RNASEH1O60930 286 aaKnown RBP9□□□□□ -0.97
CCDC149-204ENST00000504487 TCEA3O75764 348 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 DDNO94850 711 aaPredicted RBP9□□□□□ -0.97
CCDC149-204ENST00000504487 ABHD2P08910 425 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 SRGAP2CP0DJJ0 459 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 SRGAP2BP0DMP2 458 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 ATP5OP48047 213 aa9□□□□□ -0.97
CCDC149-204ENST00000504487 BRDTQ58F21 947 aaPredicted RBP9□□□□□ -0.97
CCDC149-204ENST00000504487 KRT39Q6A163 491 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms