RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 SYNE4Q8N205 404 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PQLC1Q8N2U9 271 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 OR2I1PQ8NGU4 316 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 NSUN6Q8TEA1 469 aaKnown RBP4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 HDAC2Q92769 488 aaKnown RBP4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 HAS1Q92839 578 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 LENG9Q96B70 501 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ZBTB10Q96DT7 871 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TBCBQ99426 244 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 MLST8Q9BVC4 326 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SH3GLB2Q9NR46 395 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 POGKQ9P215 609 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 GJD2Q9UKL4 321 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CLCA2Q9UQC9 943 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CHST2Q9Y4C5 530 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SPHKAPQ2M3C7 1700 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ATRNL1Q5VV63 1379 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 MYO5BQ9ULV0 1848 aa4.88□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ADGRB3O60242 1522 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SLIT1O75093 1534 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TRPM2O94759 1503 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TMEM131LA2VDJ0 1609 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 KDM5AP29375 1690 aaKnown RBP4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 A6NNZ2 444 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 FAM227AF5H4B4 570 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ZNF185O15231 689 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 NCR1O76036 304 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RAP2AP10114 183 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 GSPT1P15170 499 aaKnown RBP4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ALOX15P16050 662 aaPredicted RBP4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CAPN3P20807 821 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PER3P56645 1201 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 MGAT2Q10469 447 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ACAP2Q15057 778 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CLUL1Q15846 466 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 KIAA0753Q2KHM9 967 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 FAM47AQ5JRC9 791 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 DGKKQ5KSL6 1271 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SPATA1Q5VX52 437 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 AFMIDQ63HM1 303 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 DARS2Q6PI48 645 aaKnown RBP4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CASC1Q6TDU7 716 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 FAM180AQ6UWF9 173 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 Q6ZPA2 131 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 BRINP3Q76B58 766 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ZBTB34Q8NCN2 500 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 FAM156AQ8NDB6 213 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PROKR1Q8TCW9 393 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 STON2Q8WXE9 905 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CHFRQ96EP1 664 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SEC62Q99442 399 aaKnown RBP4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 NEU1Q99519 415 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 AP1M1Q9BXS5 423 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SLC26A6Q9BXS9 759 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SLC46A2Q9BY10 475 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 IKZF4Q9H2S9 585 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ZNF277Q9NRM2 450 aaPredicted RBP4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 HELLSQ9NRZ9 838 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 LANCL2Q9NS86 450 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 BLOC1S4Q9NUP1 217 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 AJAP1Q9UKB5 411 aaPredicted RBP4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ACAD8Q9UKU7 415 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ISY1Q9ULR0 285 aaKnown RBP4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 FZD1Q9UP38 647 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SIK3Q9Y2K2 1263 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TMEM2Q9UHN6 1383 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 MED14O60244 1454 aa4.87□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CLTCL1P53675 1640 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 POLR1AO95602 1720 aaPredicted RBP4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PJA2O43164 708 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PCDHGA12O60330 932 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 LPXNO60711 386 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ENDOD1O94919 500 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ITGB1P05556 798 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PYGLP06737 847 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SNRPA1P09661 255 aaKnown RBP4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 KRT4P19013 534 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 FPR1P21462 350 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 RPS6KB1P23443 525 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 MGAT1P26572 445 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 GUCY1A2P33402 732 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ALDH1A3P47895 512 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SLC6A9P48067 706 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CHN2P52757 468 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CLRN1P58418 232 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 TGFB2P61812 414 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ZBED6P86452 979 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 MPP1Q00013 466 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SP140Q13342 867 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 SEMA5AQ13591 1074 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ZNF267Q14586 743 aaPredicted RBP4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 LLGL1Q15334 1064 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 PDCD4Q53EL6 469 aaKnown RBP4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ATAT1Q5SQI0 421 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 GJC2Q5T442 439 aaPredicted RBP4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 ATXN7L2Q5T6C5 722 aaPredicted RBP4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 AGAP9Q5VTM2 703 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 KCNV1Q6PIU1 500 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 CYP26C1Q6V0L0 522 aa4.86□□□□□ -1.63
PDLIM1P4-201ENST00000504327 COLGALT2Q8IYK4 626 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms