RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 FCHO2Q0JRZ9 810 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 MTAPQ13126 283 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 PSMD6Q15008 389 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 MAPRE1Q15691 268 aaKnown RBP12.81□□□□□ -0.36
MED28-203ENST00000503945 DDR2Q16832 855 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 ARHGAP29Q52LW3 1261 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 C4orf50Q6ZRC1 276 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 CMTM8Q8IZV2 173 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 ZNF687Q8N1G0 1237 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 CELF5Q8N6W0 485 aaKnown RBP12.81□□□□□ -0.36
MED28-203ENST00000503945 BPIFB1Q8TDL5 484 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 LEO1Q8WVC0 666 aaPredicted RBP12.81□□□□□ -0.36
MED28-203ENST00000503945 EPC1Q9H2F5 836 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 C8orf33Q9H7E9 229 aaPredicted RBP12.81□□□□□ -0.36
MED28-203ENST00000503945 IL21Q9HBE4 155 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 MAGEC2Q9UBF1 373 aaPredicted RBP12.81□□□□□ -0.36
MED28-203ENST00000503945 UXTQ9UBK9 157 aaPredicted RBP12.81□□□□□ -0.36
MED28-203ENST00000503945 CDH9Q9ULB4 789 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 TICRRQ7Z2Z1 1910 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 UBE4BO95155 1302 aa12.81□□□□□ -0.36
MED28-203ENST00000503945 RALGAPA1Q6GYQ0 2036 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 A0A1B0GVL5 298 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 MYBPHLA2RUH7 354 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 PHACTR2O75167 634 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 F11P03951 625 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 MYL1P05976 194 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 HMGA1P17096 107 aaKnown RBP12.8□□□□□ -0.36
MED28-203ENST00000503945 TGM1P22735 817 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 LMO2P25791 158 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 DDX6P26196 483 aaKnown RBP eCLIP12.8□□□□□ -0.361e-6■□□□□ 9.2
MED28-203ENST00000503945 NLRP12P59046 1061 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 PLCB2Q00722 1185 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 CYP24A1Q07973 514 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 PPP2R5DQ14738 602 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 BMT2Q1RMZ1 405 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 WDR72Q3MJ13 1102 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 CFAP221Q4G0U5 840 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 FAM171BQ6P995 826 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 MAMSTRQ6ZN01 415 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 GPR161Q8N6U8 529 aaKnown RBP12.8□□□□□ -0.36
MED28-203ENST00000503945 MAB21L3Q8N8X9 362 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 FSIP1Q8NA03 581 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 MRPS31Q92665 395 aaKnown RBP12.8□□□□□ -0.36
MED28-203ENST00000503945 RSPRY1Q96DX4 576 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 MSANTD3Q96H12 275 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 FUBP3Q96I24 572 aaKnown RBP eCLIP12.8□□□□□ -0.361e-7■■■□□ 17.7
MED28-203ENST00000503945 FAM84AQ96KN4 292 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 LRRC3BQ96PB8 259 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 MKNK1Q9BUB5 465 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 SNX25Q9H3E2 840 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 PRMT8Q9NR22 394 aaPredicted RBP12.8□□□□□ -0.36
MED28-203ENST00000503945 EXOC1Q9NV70 894 aa12.8□□□□□ -0.36
MED28-203ENST00000503945 SMG5Q9UPR3 1016 aaKnown RBP12.8□□□□□ -0.36
MED28-203ENST00000503945 PDCD11Q14690 1871 aaKnown RBP12.8□□□□□ -0.36
MED28-203ENST00000503945 TDGF1P13385 188 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 ATICP31939 592 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 GRIK1P39086 918 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 AP3M2P53677 418 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 NRLP54845 237 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 CYP4F8P98187 520 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 STK4Q13043 487 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 KMT5BQ4FZB7 885 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 SDHAF4Q5VUM1 108 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 TXNDC8Q6A555 127 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 CC2D1AQ6P1N0 951 aaPredicted RBP12.79□□□□□ -0.36
MED28-203ENST00000503945 LIMS2Q7Z4I7 341 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 MON1AQ86VX9 555 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 OSTM1Q86WC4 334 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 RALGPS2Q86X27 583 aaPredicted RBP12.79□□□□□ -0.36
MED28-203ENST00000503945 SCN4BQ8IWT1 228 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 C12orf56Q8IXR9 622 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 GRAMD1CQ8IYS0 662 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 OR6B3Q8NGW1 331 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 ZNF516Q92618 1163 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 CCDC47Q96A33 483 aaKnown RBP12.79□□□□□ -0.36
MED28-203ENST00000503945 MYRFLQ96LU7 910 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 CGRRF1Q99675 332 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 SCAND2PQ9GZW5 306 aaPredicted RBP12.79□□□□□ -0.36
MED28-203ENST00000503945 GKN1Q9NS71 199 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 TDP1Q9NUW8 608 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 COL4A2P08572 1712 aa12.79□□□□□ -0.36
MED28-203ENST00000503945 NCOR2Q9Y618 2525 aa12.78□□□□□ -0.36
MED28-203ENST00000503945 SLC38A8A6NNN8 435 aa12.78□□□□□ -0.36
MED28-203ENST00000503945 ARNTLO00327 626 aa12.78□□□□□ -0.36
MED28-203ENST00000503945 ACTN4O43707 911 aaKnown RBP12.78□□□□□ -0.36
MED28-203ENST00000503945 ATP2C2O75185 946 aa12.78□□□□□ -0.36
MED28-203ENST00000503945 TACC1O75410 805 aa12.78□□□□□ -0.36
MED28-203ENST00000503945 KIF20AO95235 890 aa12.78□□□□□ -0.36
MED28-203ENST00000503945 PFKFB1P16118 471 aa12.78□□□□□ -0.36
MED28-203ENST00000503945 WARSP23381 471 aaKnown RBP12.78□□□□□ -0.36
MED28-203ENST00000503945 MAGEA11P43364 429 aa12.78□□□□□ -0.36
MED28-203ENST00000503945 SYKP43405 635 aa12.78□□□□□ -0.36
MED28-203ENST00000503945 GPR15P49685 360 aa12.78□□□□□ -0.36
MED28-203ENST00000503945 TNNC1P63316 161 aa12.78□□□□□ -0.36
MED28-203ENST00000503945 AMPD2Q01433 879 aa12.78□□□□□ -0.36
MED28-203ENST00000503945 CYP27A1Q02318 531 aa12.78□□□□□ -0.36
MED28-203ENST00000503945 VSTM1Q6UX27 236 aa12.78□□□□□ -0.36
MED28-203ENST00000503945 TMEM150AQ86TG1 271 aa12.78□□□□□ -0.36
MED28-203ENST00000503945 TTC8Q8TAM2 541 aa12.78□□□□□ -0.36
MED28-203ENST00000503945 MYCBPAPQ8TBZ2 947 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms