RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 CLIC6Q96NY7 704 aa17.04■□□□□ 0.32
DDR1-250ENST00000503628 TIPINQ9BVW5 301 aa17.04■□□□□ 0.32
DDR1-250ENST00000503628 PCNX2A6NKB5 2137 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 CYP11A1P05108 521 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 HAPLN1P10915 354 aaPredicted RBP17.03■□□□□ 0.32
DDR1-250ENST00000503628 HMGA1P17096 107 aaKnown RBP17.03■□□□□ 0.32
DDR1-250ENST00000503628 GUCY2CP25092 1073 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 PDGFRLQ15198 375 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 ZRSR1Q15695 479 aaKnown RBP17.03■□□□□ 0.32
DDR1-250ENST00000503628 USP39Q53GS9 565 aaKnown RBP17.03■□□□□ 0.32
DDR1-250ENST00000503628 C9orf57Q5W0N0 161 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 JADE1Q6IE81 842 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 KIAA1211LQ6NV74 962 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 KCTD17Q8N5Z5 321 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 DEFB124Q8NES8 71 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 CD101Q93033 1021 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 EXOC4Q96A65 974 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 ACDQ96AP0 544 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 FAM212AQ96EL1 285 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 BICD1Q96G01 975 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 CDK5RAP3Q96JB5 506 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 PNMA5Q96PV4 448 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 TPSD1Q9BZJ3 242 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 ECT2Q9H8V3 914 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 RPF1Q9H9Y2 349 aaKnown RBP17.03■□□□□ 0.32
DDR1-250ENST00000503628 KIF9Q9HAQ2 790 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 KCNG1Q9UIX4 513 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 LHX6Q9UPM6 363 aa17.03■□□□□ 0.32
DDR1-250ENST00000503628 PIRO00625 290 aa17.02■□□□□ 0.32
DDR1-250ENST00000503628 FAM189A1O60320 539 aa17.02■□□□□ 0.32
DDR1-250ENST00000503628 ADRB2P07550 413 aa17.02■□□□□ 0.32
DDR1-250ENST00000503628 BCKDHBP21953 392 aa17.02■□□□□ 0.32
DDR1-250ENST00000503628 DDX6P26196 483 aaKnown RBP eCLIP17.02■□□□□ 0.32
DDR1-250ENST00000503628 KRT85P78386 507 aa17.02■□□□□ 0.32
DDR1-250ENST00000503628 TMEM119Q4V9L6 283 aa17.02■□□□□ 0.32
DDR1-250ENST00000503628 CYP2U1Q7Z449 544 aa17.02■□□□□ 0.32
DDR1-250ENST00000503628 MON1AQ86VX9 555 aa17.02■□□□□ 0.32
DDR1-250ENST00000503628 CPA6Q8N4T0 437 aa17.02■□□□□ 0.32
DDR1-250ENST00000503628 STKLD1Q8NE28 680 aa17.02■□□□□ 0.32
DDR1-250ENST00000503628 TSTD1Q8NFU3 115 aa17.02■□□□□ 0.32
DDR1-250ENST00000503628 SPPL2BQ8TCT7 592 aa17.02■□□□□ 0.32
DDR1-250ENST00000503628 C2orf15Q8WU43 125 aaKnown RBP17.02■□□□□ 0.32
DDR1-250ENST00000503628 CALML4Q96GE6 196 aa17.02■□□□□ 0.32
DDR1-250ENST00000503628 TSPAN18Q96SJ8 248 aa17.02■□□□□ 0.32
DDR1-250ENST00000503628 CCSER1Q9C0I3 900 aa17.02■□□□□ 0.32
DDR1-250ENST00000503628 ABI2Q9NYB9 513 aaPredicted RBP17.02■□□□□ 0.32
DDR1-250ENST00000503628 TCHHQ07283 1943 aa17.02■□□□□ 0.31
DDR1-250ENST00000503628 SOBPA7XYQ1 873 aa17.01■□□□□ 0.31
DDR1-250ENST00000503628 CYB561D2O14569 222 aa17.01■□□□□ 0.31
DDR1-250ENST00000503628 HYAL3O43820 417 aaPredicted RBP17.01■□□□□ 0.31
DDR1-250ENST00000503628 PAX3P23760 479 aa17.01■□□□□ 0.31
DDR1-250ENST00000503628 KYAT1Q16773 422 aa17.01■□□□□ 0.31
DDR1-250ENST00000503628 C11orf74Q86VG3 221 aa17.01■□□□□ 0.31
DDR1-250ENST00000503628 METTL23Q86XA0 190 aa17.01■□□□□ 0.31
DDR1-250ENST00000503628 THEM5Q8N1Q8 247 aa17.01■□□□□ 0.31
DDR1-250ENST00000503628 TTC16Q8NEE8 873 aa17.01■□□□□ 0.31
DDR1-250ENST00000503628 PIGKQ92643 395 aa17.01■□□□□ 0.31
DDR1-250ENST00000503628 MRPS31Q92665 395 aaKnown RBP17.01■□□□□ 0.31
DDR1-250ENST00000503628 EPSTI1Q96J88 318 aa17.01■□□□□ 0.31
DDR1-250ENST00000503628 PLIN2Q99541 437 aa17.01■□□□□ 0.31
DDR1-250ENST00000503628 DUS2Q9NX74 493 aaKnown RBP17.01■□□□□ 0.31
DDR1-250ENST00000503628 RCOR1Q9UKL0 485 aa17.01■□□□□ 0.31
DDR1-250ENST00000503628 DSEQ9UL01 958 aa17.01■□□□□ 0.31
DDR1-250ENST00000503628 CIZ1Q9ULV3 898 aaPredicted RBP17.01■□□□□ 0.31
DDR1-250ENST00000503628 MAGED2Q9UNF1 606 aaPredicted RBP17.01■□□□□ 0.31
DDR1-250ENST00000503628 PTPRDP23468 1912 aa17■□□□□ 0.31
DDR1-250ENST00000503628 ANO9A1A5B4 782 aa17■□□□□ 0.31
DDR1-250ENST00000503628 OGTO15294 1046 aa17■□□□□ 0.31
DDR1-250ENST00000503628 CUTAO60888 179 aa17■□□□□ 0.31
DDR1-250ENST00000503628 NFICP08651 508 aa17■□□□□ 0.31
DDR1-250ENST00000503628 TXLNAP40222 546 aa17■□□□□ 0.31
DDR1-250ENST00000503628 DHPSP49366 369 aaPredicted RBP17■□□□□ 0.31
DDR1-250ENST00000503628 GPR15P49685 360 aa17■□□□□ 0.31
DDR1-250ENST00000503628 LIG4P49917 911 aa17■□□□□ 0.31
DDR1-250ENST00000503628 SMARCB1Q12824 385 aa17■□□□□ 0.31
DDR1-250ENST00000503628 ZNF268Q14587 947 aaPredicted RBP17■□□□□ 0.31
DDR1-250ENST00000503628 MTF1Q14872 753 aa17■□□□□ 0.31
DDR1-250ENST00000503628 USP49Q70CQ1 688 aa17■□□□□ 0.31
DDR1-250ENST00000503628 RASSF8Q8NHQ8 419 aa17■□□□□ 0.31
DDR1-250ENST00000503628 OSCP1Q8WVF1 389 aa17■□□□□ 0.31
DDR1-250ENST00000503628 CYP2S1Q96SQ9 504 aa17■□□□□ 0.31
DDR1-250ENST00000503628 PYM1Q9BRP8 204 aaKnown RBP17■□□□□ 0.31
DDR1-250ENST00000503628 NEUROG3Q9Y4Z2 214 aa17■□□□□ 0.31
DDR1-250ENST00000503628 WNT6Q9Y6F9 365 aa17■□□□□ 0.31
DDR1-250ENST00000503628 PI4KAP42356 2102 aa17■□□□□ 0.31
DDR1-250ENST00000503628 GON4LQ3T8J9 2241 aa17■□□□□ 0.31
DDR1-250ENST00000503628 ITPR1Q14643 2758 aa16.99■□□□□ 0.31
DDR1-250ENST00000503628 NPHP3-ACAD11A0A0J9YXS1 232 aa16.99■□□□□ 0.31
DDR1-250ENST00000503628 ANTXRLA6NF34 631 aa16.99■□□□□ 0.31
DDR1-250ENST00000503628 PLCG1P19174 1290 aa16.99■□□□□ 0.31
DDR1-250ENST00000503628 ME1P48163 572 aa16.99■□□□□ 0.31
DDR1-250ENST00000503628 NCKAP1LP55160 1127 aa16.99■□□□□ 0.31
DDR1-250ENST00000503628 C2orf27AQ580R0 203 aa16.99■□□□□ 0.31
DDR1-250ENST00000503628 SDHAF4Q5VUM1 108 aa16.99■□□□□ 0.31
DDR1-250ENST00000503628 WSCD1Q658N2 575 aa16.99■□□□□ 0.31
DDR1-250ENST00000503628 ANO7Q6IWH7 933 aa16.99■□□□□ 0.31
DDR1-250ENST00000503628 RASSF3Q86WH2 238 aa16.99■□□□□ 0.31
DDR1-250ENST00000503628 CD302Q8IX05 232 aa16.99■□□□□ 0.31
DDR1-250ENST00000503628 LEO1Q8WVC0 666 aaPredicted RBP16.99■□□□□ 0.31
DDR1-250ENST00000503628 ATP2A3Q93084 1043 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms