RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 DDX47Q9H0S4 455 aaKnown RBP2.94□□□□□ -1.94
NEDD4-204ENST00000503468 MAGEE1Q9HCI5 957 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 EPB41L5Q9HCM4 733 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 GDF3Q9NR23 364 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 TMOD4Q9NZQ9 345 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 PI4KBQ9UBF8 816 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 UTP11Q9Y3A2 253 aaKnown RBP2.94□□□□□ -1.94
NEDD4-204ENST00000503468 GPC6Q9Y625 555 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-204ENST00000503468 GSTTP1A0A1W2PQM5 241 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 H7C0S8 307 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 GPR25O00155 361 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 DNAJA2O60884 412 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 GMNNO75496 209 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 CIB2O75838 187 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 PDE5AO76074 875 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ALDH1A2O94788 518 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 GGPS1O95749 300 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 KRT14P02533 472 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 GYPCP04921 128 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 CD97P48960 835 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 NCALDP61601 193 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 BEX3Q00994 111 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 MCL1Q07820 350 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 FSTL1Q12841 308 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 EIF2B5Q13144 721 aaKnown RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 IFIT5Q13325 482 aaKnown RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 RAPGEF1Q13905 1077 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 STEAP4Q687X5 459 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 KRT40Q6A162 431 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 TMEM154Q6P9G4 183 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 PI16Q6UXB8 463 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ACAD11Q709F0 780 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 CENPUQ71F23 418 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ANO5Q75V66 913 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 FRMD5Q7Z6J6 570 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 PHF13Q86YI8 300 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 CREG2Q8IUH2 290 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 SYCP3Q8IZU3 236 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 NKAIN3Q8N8D7 197 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 RIN2Q8WYP3 895 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 KCTD13Q8WZ19 329 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 SCARF2Q96GP6 870 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ACAP3Q96P50 834 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 FNBP1Q96RU3 617 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ZSCAN10Q96SZ4 725 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 FRMD8P1Q9BZ68 369 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF518BQ9C0D4 1074 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 EPC1Q9H2F5 836 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 USTQ9Y2C2 406 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 GOLGA8BA8MQT2 603 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 RNF225M0QZC1 329 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 TNFRSF10BO14763 440 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 NKRFO15226 690 aaKnown RBP eCLIP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 TBX19O60806 448 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 PORP16435 677 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 STX2P32856 288 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 KRT2P35908 639 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 STAT6P42226 847 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 CACNA2D1P54289 1103 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 OXCT1P55809 520 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 GPSM2P81274 684 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 SNX1Q13596 522 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 RCN1Q15293 331 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 OASLQ15646 514 aaKnown RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 TBCCQ15814 346 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ERFEQ4G0M1 354 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 THOC7Q6I9Y2 204 aaKnown RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 C16orf87Q6PH81 154 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 LILRA6Q6PI73 481 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 C1orf228Q6PIY5 440 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 CLEC14AQ86T13 490 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 AACSQ86V21 672 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ERICH1Q86X53 443 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 TICAM1Q8IUC6 712 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 CCDC82Q8N4S0 544 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 TEX26Q8N6G2 289 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ASAP3Q8TDY4 903 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 FGF11Q92914 225 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 NTAN1Q96AB6 310 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 CFAP57Q96MR6 1250 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 SETDB2Q96T68 719 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 RAB34Q9BZG1 259 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 PICK1Q9NRD5 415 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 EMILIN3Q9NT22 766 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 UBAP1Q9NZ09 502 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 RSL24D1Q9UHA3 163 aaKnown RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF232Q9UNY5 417 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 IKBKGQ9Y6K9 419 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 PNMA6FA0A0J9YX94 578 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 RASGRF2O14827 1237 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 JAK2O60674 1132 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 GJB6O95452 261 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 PTPN4P29074 926 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 SERPINB3P29508 390 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 PRDX5P30044 214 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 MTIF2P46199 727 aaKnown RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 ALDH5A1P51649 535 aaPredicted RBP2.93□□□□□ -1.94
NEDD4-204ENST00000503468 PMS2P54278 862 aa2.93□□□□□ -1.94
NEDD4-204ENST00000503468 SLC34A1Q06495 639 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms