RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 GPRC5CQ9NQ84 441 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 PKD2L2Q9NZM6 624 aa16.84■□□□□ 0.29
HMGXB3-202ENST00000503427 METTL7BQ6UX53 244 aa16.83■□□□□ 0.29
HMGXB3-202ENST00000503427 PCYOX1LQ8NBM8 494 aa16.83■□□□□ 0.29
HMGXB3-202ENST00000503427 NAF1Q96HR8 494 aaKnown RBP16.83■□□□□ 0.29
HMGXB3-202ENST00000503427 GLT1D1Q96MS3 346 aa16.83■□□□□ 0.29
HMGXB3-202ENST00000503427 SPATC1LQ9H0A9 340 aa16.83■□□□□ 0.29
HMGXB3-202ENST00000503427 FARP1Q9Y4F1 1045 aaPredicted RBP16.83■□□□□ 0.29
HMGXB3-202ENST00000503427 C3P01024 1663 aa16.83■□□□□ 0.29
HMGXB3-202ENST00000503427 MTSS1O43312 755 aa16.83■□□□□ 0.29
HMGXB3-202ENST00000503427 GRAP2O75791 330 aa16.83■□□□□ 0.29
HMGXB3-202ENST00000503427 SGPL1O95470 568 aa16.83■□□□□ 0.29
HMGXB3-202ENST00000503427 FOXD4Q12950 439 aaPredicted RBP16.83■□□□□ 0.29
HMGXB3-202ENST00000503427 TRIP10Q15642 601 aa16.83■□□□□ 0.29
HMGXB3-202ENST00000503427 TMEM154Q6P9G4 183 aa16.83■□□□□ 0.29
HMGXB3-202ENST00000503427 OR9Q1Q8NGQ5 310 aa16.83■□□□□ 0.29
HMGXB3-202ENST00000503427 EME1Q96AY2 570 aa16.83■□□□□ 0.29
HMGXB3-202ENST00000503427 TEX12Q9BXU0 123 aa16.83■□□□□ 0.29
HMGXB3-202ENST00000503427 METTL5Q9NRN9 209 aaKnown RBP16.83■□□□□ 0.29
HMGXB3-202ENST00000503427 ZBTB22O15209 634 aa16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 VIL1P09327 827 aaKnown RBP16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 CYP2C8P10632 490 aa16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 BRD2P25440 801 aaKnown RBP16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 LRRC36Q1X8D7 754 aa16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 MPZL3Q6UWV2 235 aa16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 CALML6Q8TD86 181 aa16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 EPS8L3Q8TE67 593 aaKnown RBP16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 KCNQ5Q9NR82 932 aa16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 CDYLQ9Y232 598 aa16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 GTPBP10A4D1E9 387 aaKnown RBP16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 DNAJC6O75061 913 aa16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 CTCFP49711 727 aaPredicted RBP16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 SNX17Q15036 470 aa16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 PRPF39Q86UA1 669 aaKnown RBP16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 MAGEB18Q96M61 343 aa16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 RAB21Q9UL25 225 aa16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 KIAA1257Q9ULG3 409 aa16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 H3BQF6 201 aa16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 PGM5Q15124 567 aa16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 CHI3L2Q15782 390 aa16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 C1orf131Q8NDD1 294 aaKnown RBP16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 C20orf96Q9NUD7 363 aaPredicted RBP16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 PHTF1Q9UMS5 762 aa16.83■□□□□ 0.28
HMGXB3-202ENST00000503427 GNL1P36915 607 aaPredicted RBP16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 CASP4P49662 377 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 CBWD2Q8IUF1 395 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 GPC2Q8N158 579 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 GANCQ8TET4 914 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 ATP8B4Q8TF62 1192 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 ELMO2Q96JJ3 720 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 MMTAG2Q9BU76 263 aaKnown RBP16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 TRIM49D1C9J1S8 452 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 TLR2O60603 784 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 ST3GAL1Q11201 340 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 PDAP1Q13442 181 aaKnown RBP16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 PIDD1Q9HB75 910 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 FAM49BQ9NUQ9 324 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 VWA5AO00534 786 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 NKRFO15226 690 aaKnown RBP eCLIP16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 ITGB3P05106 788 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 CYP11B1P15538 503 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 VHLP40337 213 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 TTC23LQ6PF05 361 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 ZNF571Q7Z3V5 609 aaPredicted RBP16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 CHCHD3Q9NX63 227 aaKnown RBP16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 AIM2O14862 343 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 ADCY3O60266 1144 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 KRT16P08779 473 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 SLC30A9Q6PML9 568 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 KDELC2Q7Z4H8 507 aa16.82■□□□□ 0.28
HMGXB3-202ENST00000503427 RIC1Q4ADV7 1423 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 F8VZ95 297 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 TBX2Q13207 712 aaPredicted RBP16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 CAMTA1Q9Y6Y1 1673 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 O00370 1275 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 ZNF197O14709 1029 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 PGK2P07205 417 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 MAPRE1Q15691 268 aaKnown RBP16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 LRRC6Q86X45 466 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 DPP3Q9NY33 737 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 AKAP10O43572 662 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 MAN1A2O60476 641 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 SRP72O76094 671 aaKnown RBP16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 CYP4A22Q5TCH4 519 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 ARID3BQ8IVW6 561 aaPredicted RBP16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 FBXO25Q8TCJ0 367 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 DTNBP1Q96EV8 351 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 CGRRF1Q99675 332 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 CBWD1Q9BRT8 395 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 RUBCNLQ9H714 662 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 PCDHGB4Q9UN71 923 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 CAND2O75155 1236 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 NQO1P15559 274 aaKnown RBP16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 HMOX2P30519 316 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 IRX1P78414 480 aaPredicted RBP16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 MKL1Q969V6 931 aa16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.81■□□□□ 0.28
HMGXB3-202ENST00000503427 GOLGA7BQ2TAP0 167 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 MROH9Q5TGP6 573 aa16.8■□□□□ 0.28
HMGXB3-202ENST00000503427 SZRD1Q7Z422 152 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms