RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 FAM200AQ8TCP9 573 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 TNIP3Q96KP6 325 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 KREMEN1Q96MU8 473 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 NT5C1AQ9BXI3 368 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 B3GNT5Q9BYG0 378 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 POMKQ9H5K3 350 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 UBE2TQ9NPD8 197 aaPredicted RBP17.56■□□□□ 0.4
SCLT1-205ENST00000503401 FAM49BQ9NUQ9 324 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 CEP72Q9P209 647 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 MAFFQ9ULX9 164 aa17.56■□□□□ 0.4
SCLT1-205ENST00000503401 ATF6P18850 670 aa17.55■□□□□ 0.4
SCLT1-205ENST00000503401 SP100P23497 879 aaPredicted RBP17.55■□□□□ 0.4
SCLT1-205ENST00000503401 ALDH1A3P47895 512 aa17.55■□□□□ 0.4
SCLT1-205ENST00000503401 MAPRE1Q15691 268 aaKnown RBP17.55■□□□□ 0.4
SCLT1-205ENST00000503401 SMAD2Q15796 467 aaKnown RBP17.55■□□□□ 0.4
SCLT1-205ENST00000503401 DDR2Q16832 855 aa17.55■□□□□ 0.4
SCLT1-205ENST00000503401 C4orf50Q6ZRC1 276 aa17.55■□□□□ 0.4
SCLT1-205ENST00000503401 UBR7Q8N806 425 aa17.55■□□□□ 0.4
SCLT1-205ENST00000503401 GIPC2Q8TF65 315 aa17.55■□□□□ 0.4
SCLT1-205ENST00000503401 ZNF518BQ9C0D4 1074 aa17.55■□□□□ 0.4
SCLT1-205ENST00000503401 SIX2Q9NPC8 291 aa17.55■□□□□ 0.4
SCLT1-205ENST00000503401 APEX2Q9UBZ4 518 aa17.55■□□□□ 0.4
SCLT1-205ENST00000503401 AJAP1Q9UKB5 411 aaPredicted RBP17.55■□□□□ 0.4
SCLT1-205ENST00000503401 DENND4AQ7Z401 1863 aa17.55■□□□□ 0.4
SCLT1-205ENST00000503401 XYLBO75191 536 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 CAVIN2O95810 425 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 BMP1P13497 986 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 ACO1P21399 889 aaKnown RBP17.54■□□□□ 0.4
SCLT1-205ENST00000503401 TUFMP49411 452 aaKnown RBP17.54■□□□□ 0.4
SCLT1-205ENST00000503401 KLK7P49862 253 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 CACNA2D1P54289 1103 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 RAD23BP54727 409 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 GCNT1Q02742 428 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 PTPN21Q16825 1174 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 CFAP221Q4G0U5 840 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 TMEM270Q6UE05 265 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 RTL10Q7L3V2 364 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 SCN4BQ8IWT1 228 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 CRYBG2Q8N1P7 616 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 SLC4A11Q8NBS3 891 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 RIPOR3Q96MK2 946 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 MED10Q9BTT4 135 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 TMEM30AQ9NV96 361 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 DNMT3BQ9UBC3 853 aaKnown RBP17.54■□□□□ 0.4
SCLT1-205ENST00000503401 PCDHB4Q9Y5E5 795 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 LRRC10BA6NIK2 292 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 LGALS16A8MUM7 142 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 PAPLNO95428 1278 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 MTHFRP42898 656 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 EPHB3P54753 998 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 ARHGAP44Q17R89 818 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 PUS10Q3MIT2 529 aaKnown RBP17.54■□□□□ 0.4
SCLT1-205ENST00000503401 DPY19L2P1Q6NXN4 242 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 PAQR9Q6ZVX9 377 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 HS6ST3Q8IZP7 471 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 FUKQ8N0W3 1084 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 RNF214Q8ND24 703 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 SLC2A14Q8TDB8 520 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 TMEM176AQ96HP8 235 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 FUBP3Q96I24 572 aaKnown RBP eCLIP17.54■□□□□ 0.4
SCLT1-205ENST00000503401 HEXIM2Q96MH2 286 aaKnown RBP17.54■□□□□ 0.4
SCLT1-205ENST00000503401 CORO1BQ9BR76 489 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 LSM14BQ9BX40 385 aaKnown RBP17.54■□□□□ 0.4
SCLT1-205ENST00000503401 ABCB6Q9NP58 842 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 HSFX1Q9UBD0 423 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 TRIOO75962 3097 aa17.54■□□□□ 0.4
SCLT1-205ENST00000503401 GREB1Q4ZG55 1949 aa17.53■□□□□ 0.4
SCLT1-205ENST00000503401 DOCK8Q8NF50 2099 aa17.53■□□□□ 0.4
SCLT1-205ENST00000503401 RNF225M0QZC1 329 aaPredicted RBP17.53■□□□□ 0.4
SCLT1-205ENST00000503401 CALCAP01258 141 aa17.53■□□□□ 0.4
SCLT1-205ENST00000503401 ADORA2BP29275 332 aa17.53■□□□□ 0.4
SCLT1-205ENST00000503401 GRIK1P39086 918 aa17.53■□□□□ 0.4
SCLT1-205ENST00000503401 YWHAEP62258 255 aaKnown RBP17.53■□□□□ 0.4
SCLT1-205ENST00000503401 UBXN1Q04323 297 aa17.53■□□□□ 0.4
SCLT1-205ENST00000503401 FKBP15Q5T1M5 1219 aa17.53■□□□□ 0.4
SCLT1-205ENST00000503401 FAM35AQ86V20 835 aa17.53■□□□□ 0.4
SCLT1-205ENST00000503401 TTC39CQ8N584 583 aa17.53■□□□□ 0.4
SCLT1-205ENST00000503401 ZNF512Q96ME7 567 aaPredicted RBP17.53■□□□□ 0.4
SCLT1-205ENST00000503401 WDR6Q9NNW5 1121 aaKnown RBP17.53■□□□□ 0.4
SCLT1-205ENST00000503401 GOLGA6L19H0YKK7 550 aa17.52■□□□□ 0.4
SCLT1-205ENST00000503401 TEX33O43247 280 aa17.52■□□□□ 0.4
SCLT1-205ENST00000503401 RHOP08100 348 aa17.52■□□□□ 0.4
SCLT1-205ENST00000503401 ZNF445P59923 1031 aa17.52■□□□□ 0.4
SCLT1-205ENST00000503401 PLD1Q13393 1074 aa17.52■□□□□ 0.4
SCLT1-205ENST00000503401 ELMOD1Q8N336 334 aa17.52■□□□□ 0.4
SCLT1-205ENST00000503401 CYFIP2Q96F07 1278 aa17.52■□□□□ 0.4
SCLT1-205ENST00000503401 NECTIN4Q96NY8 510 aa17.52■□□□□ 0.4
SCLT1-205ENST00000503401 KRT82Q9NSB4 513 aa17.52■□□□□ 0.4
SCLT1-205ENST00000503401 FAM50BQ9Y247 325 aa17.52■□□□□ 0.4
SCLT1-205ENST00000503401 CLUHO75153 1309 aa17.52■□□□□ 0.39
SCLT1-205ENST00000503401 ZNF638Q14966 1978 aaKnown RBP17.52■□□□□ 0.39
SCLT1-205ENST00000503401 F8VP50 259 aa17.51■□□□□ 0.39
SCLT1-205ENST00000503401 NRG2O14511 850 aaPredicted RBP17.51■□□□□ 0.39
SCLT1-205ENST00000503401 POU2F2P09086 479 aa17.51■□□□□ 0.39
SCLT1-205ENST00000503401 KRT5P13647 590 aa17.51■□□□□ 0.39
SCLT1-205ENST00000503401 PTPN2P17706 415 aa17.51■□□□□ 0.39
SCLT1-205ENST00000503401 MAGEA11P43364 429 aa17.51■□□□□ 0.39
SCLT1-205ENST00000503401 MFAP3P55082 362 aa17.51■□□□□ 0.39
SCLT1-205ENST00000503401 TPM4P67936 248 aa17.51■□□□□ 0.39
SCLT1-205ENST00000503401 MTMR3Q13615 1198 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms