RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 PECAM1P16284 738 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 TNFAIP3P21580 790 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 LRPAP1P30533 357 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 MAN1A1P33908 653 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 KRT17Q04695 432 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 ZNF844Q08AG5 666 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 NSUN2Q08J23 767 aaKnown RBP eCLIP6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 ELAVL1Q15717 326 aaKnown RBP6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 ZNF750Q32MQ0 723 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 ADCK5Q3MIX3 580 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 ANKRD45Q5TZF3 282 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 CACHD1Q5VU97 1274 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 SLC30A10Q6XR72 485 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 KCTD20Q7Z5Y7 419 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 TAX1BP1Q86VP1 789 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 TICAM2Q86XR7 235 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 ZNF280BQ86YH2 543 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 FTSJ3Q8IY81 847 aaKnown RBP6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 LGI4Q8N135 537 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 PSD4Q8NDX1 1056 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 MDGA1Q8NFP4 955 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 MARS2Q96GW9 593 aaKnown RBP6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 PNKPQ96T60 521 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 MPHOSPH9Q99550 1183 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 MLXIPQ9HAP2 919 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 DTNAQ9Y4J8 743 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 RAD54BQ9Y620 910 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 HS3ST4Q9Y661 456 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 CDY1Q9Y6F8 540 aa6.15□□□□□ -1.42
HMGB1P3-201ENST00000502802 PIAS2O75928 621 aa6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 USP1O94782 785 aa6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 CKMT1AP12532 417 aa6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 CHRM3P20309 590 aa6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 CST5P28325 142 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 KCNC1P48547 511 aa6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 LOXL3P58215 753 aa6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 LILRA4P59901 499 aa6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 KCNAB1Q14722 419 aa6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 KCNA10Q16322 511 aa6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 TAPT1Q6NXT6 567 aa6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 TAF2Q6P1X5 1199 aa6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 LAYNQ6UX15 382 aa6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 MAATS1Q7Z4T9 603 aa6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 NSUN7Q8NE18 718 aaKnown RBP6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 POC1BQ8TC44 478 aa6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 RBM15Q96T37 977 aaKnown RBP eCLIP6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 PYM1Q9BRP8 204 aaKnown RBP6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 SLC46A2Q9BY10 475 aa6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 PLA2G3Q9NZ20 509 aa6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 GGA3Q9NZ52 723 aa6.14□□□□□ -1.43
HMGB1P3-201ENST00000502802 CCDC195A0A1B0GUA6 201 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 B9A039 149 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 SOAT2O75908 522 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 ACTL6BO94805 426 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 RHOBTB3O94955 611 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 NTSR2O95665 410 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 POLBP06746 335 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 GYS1P13807 737 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 HK1P19367 917 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 CNTFP26441 200 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 MST1P26927 711 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 SLC5A2P31639 672 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 ADD2P35612 726 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 CASP2P42575 452 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 GCLCP48506 637 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 PXNP49023 591 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 DGKEP52429 567 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 AP2B1P63010 937 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 FOXD4Q12950 439 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 G3BP1Q13283 466 aaKnown RBP eCLIP6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 EFR3AQ14156 821 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 SURF1Q15526 300 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 FAM110CQ1W6H9 321 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 ZIK1Q3SY52 487 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 DCAF17Q5H9S7 520 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 RETSATQ6NUM9 610 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 LRRTM4Q86VH4 590 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 SYT12Q8IV01 421 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 OR1N1Q8NGS0 311 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 SLC30A5Q8TAD4 765 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 BPIFB1Q8TDL5 484 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 ASB12Q8WXK4 309 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 FAM227BQ96M60 508 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 OR14A2Q96R54 314 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 SEC62Q99442 399 aaKnown RBP6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 SLC38A3Q99624 504 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 RTKNQ9BST9 563 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 DDX23Q9BUQ8 820 aaKnown RBP6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 PABPC3Q9H361 631 aaKnown RBP6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 TP63Q9H3D4 680 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 RIC8AQ9NPQ8 531 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 HELLSQ9NRZ9 838 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 TMOD4Q9NZQ9 345 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 IFT80Q9P2H3 777 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 HPSEQ9Y251 543 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 SH3BP1Q9Y3L3 701 aa6.13□□□□□ -1.43
HMGB1P3-201ENST00000502802 HMX3A6NHT5 357 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 DNPH1O43598 174 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 RGS10O43665 173 aa6.12□□□□□ -1.43
HMGB1P3-201ENST00000502802 CCNT2O60583 730 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms