RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 GRASPQ7Z6J2 395 aaPredicted RBP26.73■■□□□ 1.87
LSM6-202ENST00000502781 ADHFE1Q8IWW8 467 aa26.73■■□□□ 1.87
LSM6-202ENST00000502781 PPM1KQ8N3J5 372 aa26.73■■□□□ 1.87
LSM6-202ENST00000502781 B3GNT5Q9BYG0 378 aa26.73■■□□□ 1.87
LSM6-202ENST00000502781 ASB3Q9Y575 518 aa26.73■■□□□ 1.87
LSM6-202ENST00000502781 CLUHO75153 1309 aa26.73■■□□□ 1.87
LSM6-202ENST00000502781 ACO1P21399 889 aaKnown RBP26.72■■□□□ 1.87
LSM6-202ENST00000502781 EPHB3P54753 998 aa26.72■■□□□ 1.87
LSM6-202ENST00000502781 YWHAEP62258 255 aaKnown RBP26.72■■□□□ 1.87
LSM6-202ENST00000502781 ZP2Q05996 745 aa26.72■■□□□ 1.87
LSM6-202ENST00000502781 ORC1Q13415 861 aa26.72■■□□□ 1.87
LSM6-202ENST00000502781 DPY19L2P1Q6NXN4 242 aa26.72■■□□□ 1.87
LSM6-202ENST00000502781 PAQR9Q6ZVX9 377 aa26.72■■□□□ 1.87
LSM6-202ENST00000502781 KAT5Q92993 513 aa26.72■■□□□ 1.87
LSM6-202ENST00000502781 CBX8Q9HC52 389 aa26.72■■□□□ 1.87
LSM6-202ENST00000502781 HCFC1R1Q9NWW0 138 aa26.72■■□□□ 1.87
LSM6-202ENST00000502781 TTC28Q96AY4 2481 aa26.72■■□□□ 1.87
LSM6-202ENST00000502781 PTPN2P17706 415 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 RAD23BP54727 409 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 EPHA5P54756 1037 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 CYP27A1Q02318 531 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 FUKQ8N0W3 1084 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 ELMOD1Q8N336 334 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 SLC4A11Q8NBS3 891 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 PSMG2Q969U7 264 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 ZNF512Q96ME7 567 aaPredicted RBP26.71■■□□□ 1.87
LSM6-202ENST00000502781 KREMEN1Q96MU8 473 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 LRRC3Q9BY71 257 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 SIX2Q9NPC8 291 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 USTQ9Y2C2 406 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 DOCK6Q96HP0 2047 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 RHOP08100 348 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 ATP1A3P13637 1013 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 BDNFP23560 247 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 COPB1P53618 953 aaKnown RBP26.71■■□□□ 1.87
LSM6-202ENST00000502781 RPL10AP62906 217 aaKnown RBP26.71■■□□□ 1.87
LSM6-202ENST00000502781 NTHL1P78549 312 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 KCNMA1Q12791 1236 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 PABPC1LQ4VXU2 614 aaKnown RBP26.71■■□□□ 1.87
LSM6-202ENST00000502781 IQCEQ6IPM2 695 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 RRAGAQ7L523 313 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 C12orf29Q8N999 325 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 JAKMIP2Q96AA8 810 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 ZNF518BQ9C0D4 1074 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 VPS16Q9H269 839 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 TMEM30AQ9NV96 361 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 APEX2Q9UBZ4 518 aa26.71■■□□□ 1.87
LSM6-202ENST00000502781 DENND4AQ7Z401 1863 aa26.7■■□□□ 1.87
LSM6-202ENST00000502781 NCOR1O75376 2440 aa26.7■■□□□ 1.86
LSM6-202ENST00000502781 C19orf67A6NJJ6 358 aa26.7■■□□□ 1.86
LSM6-202ENST00000502781 GPR15P49685 360 aa26.7■■□□□ 1.86
LSM6-202ENST00000502781 DDR2Q16832 855 aa26.7■■□□□ 1.86
LSM6-202ENST00000502781 DNAJB7Q7Z6W7 309 aaPredicted RBP26.7■■□□□ 1.86
LSM6-202ENST00000502781 FAM35AQ86V20 835 aa26.7■■□□□ 1.86
LSM6-202ENST00000502781 ANKRD20A12PQ8NF67 263 aa26.7■■□□□ 1.86
LSM6-202ENST00000502781 ADAMTS19Q8TE59 1207 aa26.7■■□□□ 1.86
LSM6-202ENST00000502781 TMEM176AQ96HP8 235 aa26.7■■□□□ 1.86
LSM6-202ENST00000502781 CEP295NLQ96MC4 621 aa26.7■■□□□ 1.86
LSM6-202ENST00000502781 HNRNPABQ99729 332 aaKnown RBP26.7■■□□□ 1.86
LSM6-202ENST00000502781 CORO1BQ9BR76 489 aa26.7■■□□□ 1.86
LSM6-202ENST00000502781 NOTCH4Q99466 2003 aa26.69■■□□□ 1.86
LSM6-202ENST00000502781 PTPRDP23468 1912 aa26.69■■□□□ 1.86
LSM6-202ENST00000502781 BECN2A8MW95 431 aa26.69■■□□□ 1.86
LSM6-202ENST00000502781 LOC730098B7Z3J9 87 aa26.69■■□□□ 1.86
LSM6-202ENST00000502781 CLDN5O00501 218 aa26.69■■□□□ 1.86
LSM6-202ENST00000502781 TRIM21P19474 475 aaKnown RBP26.69■■□□□ 1.86
LSM6-202ENST00000502781 CDK11BP21127 795 aaKnown RBP26.69■■□□□ 1.86
LSM6-202ENST00000502781 APBA1Q02410 837 aa26.69■■□□□ 1.86
LSM6-202ENST00000502781 ZNF394Q53GI3 561 aa26.69■■□□□ 1.86
LSM6-202ENST00000502781 SMYD5Q6GMV2 418 aa26.69■■□□□ 1.86
LSM6-202ENST00000502781 ENOSF1Q7L5Y1 443 aa26.69■■□□□ 1.86
LSM6-202ENST00000502781 ITIH5Q86UX2 942 aa26.69■■□□□ 1.86
LSM6-202ENST00000502781 TMC8Q8IU68 726 aa26.69■■□□□ 1.86
LSM6-202ENST00000502781 LEMD2Q8NC56 503 aa26.69■■□□□ 1.86
LSM6-202ENST00000502781 SPATA17Q96L03 361 aa26.69■■□□□ 1.86
LSM6-202ENST00000502781 C8orf48Q96LL4 319 aa26.69■■□□□ 1.86
LSM6-202ENST00000502781 FAM81BQ96LP2 452 aa26.69■■□□□ 1.86
LSM6-202ENST00000502781 DNAI2Q9GZS0 605 aa26.69■■□□□ 1.86
LSM6-202ENST00000502781 UBE2TQ9NPD8 197 aaPredicted RBP26.69■■□□□ 1.86
LSM6-202ENST00000502781 CNTN6Q9UQ52 1028 aa26.69■■□□□ 1.86
LSM6-202ENST00000502781 TCF20Q9UGU0 1960 aaKnown RBP26.68■■□□□ 1.86
LSM6-202ENST00000502781 VCANP13611 3396 aa26.68■■□□□ 1.86
LSM6-202ENST00000502781 CCDC130P13994 396 aa26.68■■□□□ 1.86
LSM6-202ENST00000502781 CACNA2D1P54289 1103 aa26.68■■□□□ 1.86
LSM6-202ENST00000502781 VEPH1Q14D04 833 aa26.68■■□□□ 1.86
LSM6-202ENST00000502781 SLC5A9Q2M3M2 681 aa26.68■■□□□ 1.86
LSM6-202ENST00000502781 PRSS36Q5K4E3 855 aa26.68■■□□□ 1.86
LSM6-202ENST00000502781 LRSAM1Q6UWE0 723 aa26.68■■□□□ 1.86
LSM6-202ENST00000502781 HS6ST3Q8IZP7 471 aa26.68■■□□□ 1.86
LSM6-202ENST00000502781 FAM200AQ8TCP9 573 aa26.68■■□□□ 1.86
LSM6-202ENST00000502781 SLC2A14Q8TDB8 520 aa26.68■■□□□ 1.86
LSM6-202ENST00000502781 FAM49BQ9NUQ9 324 aa26.68■■□□□ 1.86
LSM6-202ENST00000502781 ATP8B3O60423 1300 aa26.67■■□□□ 1.86
LSM6-202ENST00000502781 C5orf42Q9H799 3197 aa26.67■■□□□ 1.86
LSM6-202ENST00000502781 LGALS16A8MUM7 142 aa26.67■■□□□ 1.86
LSM6-202ENST00000502781 PES1O00541 588 aaKnown RBP26.67■■□□□ 1.86
LSM6-202ENST00000502781 TPM2P07951 284 aa26.67■■□□□ 1.86
LSM6-202ENST00000502781 HMGA1P17096 107 aaKnown RBP26.67■■□□□ 1.86
LSM6-202ENST00000502781 FSHRP23945 695 aa26.67■■□□□ 1.86
LSM6-202ENST00000502781 CCR2P41597 374 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms