RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 TMEM192Q8IY95 271 aa17.43■□□□□ 0.38
VCAN-204ENST00000502527 CLMNQ96JQ2 1002 aa17.43■□□□□ 0.38
VCAN-204ENST00000502527 PPCSQ9HAB8 311 aa17.43■□□□□ 0.38
VCAN-204ENST00000502527 UBN1Q9NPG3 1134 aa17.43■□□□□ 0.38
VCAN-204ENST00000502527 FGFR1OP2Q9NVK5 253 aa17.43■□□□□ 0.38
VCAN-204ENST00000502527 KCNH4Q9UQ05 1017 aa17.43■□□□□ 0.38
VCAN-204ENST00000502527 GPR25O00155 361 aa17.42■□□□□ 0.38
VCAN-204ENST00000502527 DDNO94850 711 aaPredicted RBP17.42■□□□□ 0.38
VCAN-204ENST00000502527 SUN1O94901 812 aa17.42■□□□□ 0.38
VCAN-204ENST00000502527 P4HA1P13674 534 aa17.42■□□□□ 0.38
VCAN-204ENST00000502527 PTPN11Q06124 597 aaPredicted RBP17.42■□□□□ 0.38
VCAN-204ENST00000502527 XRCC4Q13426 336 aa17.42■□□□□ 0.38
VCAN-204ENST00000502527 TAZQ16635 292 aa17.42■□□□□ 0.38
VCAN-204ENST00000502527 WDR78Q5VTH9 848 aa17.42■□□□□ 0.38
VCAN-204ENST00000502527 BBS12Q6ZW61 710 aa17.42■□□□□ 0.38
VCAN-204ENST00000502527 CCDC125Q86Z20 511 aa17.42■□□□□ 0.38
VCAN-204ENST00000502527 ARFGAP1Q8N6T3 406 aa17.42■□□□□ 0.38
VCAN-204ENST00000502527 SLC4A11Q8NBS3 891 aa17.42■□□□□ 0.38
VCAN-204ENST00000502527 GDAP1Q8TB36 358 aa17.42■□□□□ 0.38
VCAN-204ENST00000502527 SGSM3Q96HU1 749 aa17.42■□□□□ 0.38
VCAN-204ENST00000502527 MAGEB18Q96M61 343 aa17.42■□□□□ 0.38
VCAN-204ENST00000502527 CPXM1Q96SM3 734 aa17.42■□□□□ 0.38
VCAN-204ENST00000502527 SDCBP2Q9H190 292 aa17.42■□□□□ 0.38
VCAN-204ENST00000502527 CYP3A43Q9HB55 503 aa17.42■□□□□ 0.38
VCAN-204ENST00000502527 MLXIPLQ9NP71 852 aa17.42■□□□□ 0.38
VCAN-204ENST00000502527 POLR2AP24928 1970 aaKnown RBP17.41■□□□□ 0.38
VCAN-204ENST00000502527 CST8O60676 142 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 IQCF3P0C7M6 154 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 KDELR1P24390 212 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 IL1R2P27930 398 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 SF3A3Q12874 501 aaKnown RBP eCLIP17.41■□□□□ 0.38
VCAN-204ENST00000502527 MYO1EQ12965 1108 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 PPIL2Q13356 520 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 ACAP1Q15027 740 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 R3HDM1Q15032 1099 aaKnown RBP17.41■□□□□ 0.38
VCAN-204ENST00000502527 SMTNL2Q2TAL5 461 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 JADE1Q6IE81 842 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 ACTL9Q8TC94 416 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 ZBTB10Q96DT7 871 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 TMEM176AQ96HP8 235 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 TGS1Q96RS0 853 aaKnown RBP17.41■□□□□ 0.38
VCAN-204ENST00000502527 PLCD4Q9BRC7 762 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 ASB7Q9H672 318 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 SMYD3Q9H7B4 428 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 VPS37BQ9H9H4 285 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 IFT122Q9HBG6 1241 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 METTL5Q9NRN9 209 aaKnown RBP17.41■□□□□ 0.38
VCAN-204ENST00000502527 TJP2Q9UDY2 1190 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 PAPPA2Q9BXP8 1791 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 FAM47DPA6NHR8 397 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 ASB14A6NK59 587 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 CILPO75339 1184 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 GH1P01241 217 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 ITGB3P05106 788 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 DYNLT1P63172 113 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 OTUD4Q01804 1114 aaKnown RBP17.41■□□□□ 0.38
VCAN-204ENST00000502527 KCNT1Q5JUK3 1230 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 TMEM63BQ5T3F8 832 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 ZBED8Q8IZ13 594 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 PRCCQ92733 491 aaPredicted RBP17.41■□□□□ 0.38
VCAN-204ENST00000502527 ELOVL4Q9GZR5 314 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 RNPEPQ9H4A4 650 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 VRTNQ9H8Y1 702 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 PDGFCQ9NRA1 345 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 HAUS2Q9NVX0 235 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 SLC12A4Q9UP95 1085 aa17.41■□□□□ 0.38
VCAN-204ENST00000502527 RNF8O76064 485 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 MICAL2O94851 1124 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 ERBB2P04626 1255 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 GCAP28676 217 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 GABRB2P47870 512 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 IGBP1P78318 339 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 IL9RQ01113 521 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 FASTKD3Q14CZ7 662 aaKnown RBP17.4■□□□□ 0.38
VCAN-204ENST00000502527 KYAT1Q16773 422 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 FASTKD5Q7L8L6 764 aaKnown RBP17.4■□□□□ 0.38
VCAN-204ENST00000502527 TRABD2AQ86V40 505 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 PPIL6Q8IXY8 311 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 KIAA0319LQ8IZA0 1049 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 FUKQ8N0W3 1084 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 KCTD6Q8NC69 237 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 MCRS1Q96EZ8 462 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 PHACTR1Q9C0D0 580 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 SENP1Q9P0U3 644 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 FARP1Q9Y4F1 1045 aaPredicted RBP17.4■□□□□ 0.38
VCAN-204ENST00000502527 OTOFQ9HC10 1997 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 POC1B-GALNT4F8VUJ3 575 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 MAGEB2O15479 319 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 HMGCRP04035 888 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 INSRRP14616 1297 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 PDE4CQ08493 712 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 PDIA2Q13087 525 aaKnown RBP17.4■□□□□ 0.38
VCAN-204ENST00000502527 ORC1Q13415 861 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 HIF1AQ16665 826 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 SPATA21Q7Z572 469 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 IFNLR1Q8IU57 520 aaPredicted RBP17.4■□□□□ 0.38
VCAN-204ENST00000502527 EMC1Q8N766 993 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 RSAD2Q8WXG1 361 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 TWNKQ96RR1 684 aa17.4■□□□□ 0.38
VCAN-204ENST00000502527 SLC24A2Q9UI40 661 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms