RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 ELMO3Q96BJ8 720 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 PHF7Q9BWX1 381 aaPredicted RBP17.23■□□□□ 0.35
LMNA-217ENST00000498722 PRKD2Q9BZL6 878 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 IMPG2Q9BZV3 1241 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 SNX25Q9H3E2 840 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 PRKAG3Q9UGI9 489 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 AFF4Q9UHB7 1163 aaKnown RBP17.23■□□□□ 0.35
LMNA-217ENST00000498722 ZNF638Q14966 1978 aaKnown RBP17.23■□□□□ 0.35
LMNA-217ENST00000498722 NOTCH4Q99466 2003 aa17.23■□□□□ 0.35
LMNA-217ENST00000498722 RNF225M0QZC1 329 aaPredicted RBP17.22■□□□□ 0.35
LMNA-217ENST00000498722 P4HA2O15460 535 aa17.22■□□□□ 0.35
LMNA-217ENST00000498722 SEC24AO95486 1093 aa17.22■□□□□ 0.35
LMNA-217ENST00000498722 VNN1O95497 513 aa17.22■□□□□ 0.35
LMNA-217ENST00000498722 HLA-DRAP01903 254 aa17.22■□□□□ 0.35
LMNA-217ENST00000498722 HNRNPA1P09651 372 aaKnown RBP eCLIP17.22■□□□□ 0.35
LMNA-217ENST00000498722 LHX1P48742 406 aa17.22■□□□□ 0.35
LMNA-217ENST00000498722 FMO5P49326 533 aa17.22■□□□□ 0.35
LMNA-217ENST00000498722 MXI1P50539 228 aa17.22■□□□□ 0.35
LMNA-217ENST00000498722 MCCD1P59942 119 aaPredicted RBP17.22■□□□□ 0.35
LMNA-217ENST00000498722 ZP2Q05996 745 aa17.22■□□□□ 0.35
LMNA-217ENST00000498722 PPP3CAQ08209 521 aa17.22■□□□□ 0.35
LMNA-217ENST00000498722 CETN1Q12798 172 aa17.22■□□□□ 0.35
LMNA-217ENST00000498722 GPR17Q13304 367 aa17.22■□□□□ 0.35
LMNA-217ENST00000498722 TCEAL8Q8IYN2 117 aa17.22■□□□□ 0.35
LMNA-217ENST00000498722 DCP1BQ8IZD4 617 aaKnown RBP17.22■□□□□ 0.35
LMNA-217ENST00000498722 ZNF707Q96C28 371 aaPredicted RBP17.22■□□□□ 0.35
LMNA-217ENST00000498722 RTP3Q9BQQ7 232 aa17.22■□□□□ 0.35
LMNA-217ENST00000498722 ZCWPW1Q9H0M4 648 aa17.22■□□□□ 0.35
LMNA-217ENST00000498722 TMEM8AQ9HCN3 771 aa17.22■□□□□ 0.35
LMNA-217ENST00000498722 INSL5Q9Y5Q6 135 aa17.22■□□□□ 0.35
LMNA-217ENST00000498722 TTC28Q96AY4 2481 aa17.22■□□□□ 0.35
LMNA-217ENST00000498722 SOWAHDA6NJG2 315 aa17.21■□□□□ 0.35
LMNA-217ENST00000498722 CCDC175P0C221 793 aa17.21■□□□□ 0.35
LMNA-217ENST00000498722 P4HA1P13674 534 aa17.21■□□□□ 0.35
LMNA-217ENST00000498722 PCSK1P29120 753 aa17.21■□□□□ 0.35
LMNA-217ENST00000498722 HNRNPH3P31942 346 aaKnown RBP17.21■□□□□ 0.35
LMNA-217ENST00000498722 DUSP4Q13115 394 aa17.21■□□□□ 0.35
LMNA-217ENST00000498722 SGSM1Q2NKQ1 1148 aa17.21■□□□□ 0.35
LMNA-217ENST00000498722 KRT39Q6A163 491 aa17.21■□□□□ 0.35
LMNA-217ENST00000498722 DPH6Q7L8W6 267 aa17.21■□□□□ 0.35
LMNA-217ENST00000498722 OSTM1Q86WC4 334 aa17.21■□□□□ 0.35
LMNA-217ENST00000498722 ELMOD1Q8N336 334 aa17.21■□□□□ 0.35
LMNA-217ENST00000498722 OR6B3Q8NGW1 331 aa17.21■□□□□ 0.35
LMNA-217ENST00000498722 SYN2Q92777 582 aaPredicted RBP17.21■□□□□ 0.35
LMNA-217ENST00000498722 PI4K2AQ9BTU6 479 aa17.21■□□□□ 0.35
LMNA-217ENST00000498722 XYLT2Q9H1B5 865 aa17.21■□□□□ 0.35
LMNA-217ENST00000498722 TRMT1Q9NXH9 659 aaKnown RBP17.21■□□□□ 0.35
LMNA-217ENST00000498722 ABI2Q9NYB9 513 aaPredicted RBP17.21■□□□□ 0.35
LMNA-217ENST00000498722 SLC27A5Q9Y2P5 690 aa17.21■□□□□ 0.35
LMNA-217ENST00000498722 PPP2R2CQ9Y2T4 447 aa17.21■□□□□ 0.35
LMNA-217ENST00000498722 VCANP13611 3396 aa17.21■□□□□ 0.35
LMNA-217ENST00000498722 MTMR11A4FU01 709 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 PMM2O15305 246 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 HCRTO43612 131 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 STAU1O95793 577 aaKnown RBP17.21■□□□□ 0.34
LMNA-217ENST00000498722 PDGFRBP09619 1106 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 HOXA9P31269 272 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 GTF2H1P32780 548 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 CYLC1P35663 651 aaPredicted RBP17.21■□□□□ 0.34
LMNA-217ENST00000498722 TWF1Q12792 350 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 RTL10Q7L3V2 364 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 GRASPQ7Z6J2 395 aaPredicted RBP17.21■□□□□ 0.34
LMNA-217ENST00000498722 CCDC170Q8IYT3 715 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 GJD3Q8N144 294 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 ATAD1Q8NBU5 361 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 SPATA18Q8TC71 538 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 TAS1R2Q8TE23 839 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 PPP1R13BQ96KQ4 1090 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 SEPT5Q99719 369 aaPredicted RBP17.21■□□□□ 0.34
LMNA-217ENST00000498722 ACBD6Q9BR61 282 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 MRPL45Q9BRJ2 306 aaKnown RBP17.21■□□□□ 0.34
LMNA-217ENST00000498722 CRACR2AQ9BSW2 395 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 SMYD3Q9H7B4 428 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 GCNT4Q9P109 453 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 MAFFQ9ULX9 164 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 MYO6Q9UM54 1294 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 NR2E1Q9Y466 385 aa17.21■□□□□ 0.34
LMNA-217ENST00000498722 BDP1A6H8Y1 2624 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 CLUHO75153 1309 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 DENND4CQ5VZ89 1909 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 NOL4O94818 638 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 PON1P27169 355 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 GNL1P36915 607 aaPredicted RBP17.2■□□□□ 0.34
LMNA-217ENST00000498722 RAP1GAPP47736 663 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 ALDH1A3P47895 512 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 POLR2FP61218 127 aaKnown RBP17.2■□□□□ 0.34
LMNA-217ENST00000498722 PSMC1P62191 440 aaKnown RBP17.2■□□□□ 0.34
LMNA-217ENST00000498722 MGAT5BQ3V5L5 792 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 INTS6LQ5JSJ4 861 aaKnown RBP17.2■□□□□ 0.34
LMNA-217ENST00000498722 SPOPLQ6IQ16 392 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 RAD9BQ6WBX8 426 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 RRAGAQ7L523 313 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 LRRTM3Q86VH5 581 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 FMNL3Q8IVF7 1028 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 TTC9BQ8N6N2 239 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 KBTBD7Q8WVZ9 684 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 BAP1Q92560 729 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 TAF4BQ92750 862 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 SYT15Q9BQS2 421 aa17.2■□□□□ 0.34
LMNA-217ENST00000498722 GANQ9H2C0 597 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms