RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 ALDH3A1P30838 453 aa17.24■□□□□ 0.35
COL6A1-206ENST00000498614 TNFSF9P41273 254 aa17.24■□□□□ 0.35
COL6A1-206ENST00000498614 NCOA4Q13772 614 aa17.24■□□□□ 0.35
COL6A1-206ENST00000498614 ZBTB33Q86T24 672 aa17.24■□□□□ 0.35
COL6A1-206ENST00000498614 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.24■□□□□ 0.35
COL6A1-206ENST00000498614 SMC6Q96SB8 1091 aa17.24■□□□□ 0.35
COL6A1-206ENST00000498614 PCYT2Q99447 389 aa17.24■□□□□ 0.35
COL6A1-206ENST00000498614 GBA2Q9HCG7 927 aaPredicted RBP17.24■□□□□ 0.35
COL6A1-206ENST00000498614 ADGRA2Q96PE1 1338 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 A0A1W2PPM1 405 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 ENTPD5O75356 428 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 ETS1P14921 441 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 CA4P22748 312 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 ICAM3P32942 547 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 TAF1BQ53T94 588 aaPredicted RBP17.23■□□□□ 0.35
COL6A1-206ENST00000498614 LDLRAD1Q5T700 205 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 TRIM72Q6ZMU5 477 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 GADL1Q6ZQY3 521 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 ERO1BQ86YB8 467 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 TDRPQ86YL5 185 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 TEX9Q8N6V9 391 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 ENDOVQ8N8Q3 282 aaKnown RBP17.23■□□□□ 0.35
COL6A1-206ENST00000498614 SLC10A4Q96EP9 437 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 DENND2DQ9H6A0 471 aaPredicted RBP17.23■□□□□ 0.35
COL6A1-206ENST00000498614 MRPL47Q9HD33 250 aaKnown RBP17.23■□□□□ 0.35
COL6A1-206ENST00000498614 NUMBLQ9Y6R0 609 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 E7ENQ6 273 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 PSTPIP1O43586 416 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 PECAM1P16284 738 aaPredicted RBP17.23■□□□□ 0.35
COL6A1-206ENST00000498614 PCK1P35558 622 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 ATP13A4Q4VNC1 1196 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 PLEKHA7Q6IQ23 1121 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 OTOAQ7RTW8 1153 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 PHF13Q86YI8 300 aaPredicted RBP17.23■□□□□ 0.35
COL6A1-206ENST00000498614 KATNAL2Q8IYT4 538 aa17.23■□□□□ 0.35
COL6A1-206ENST00000498614 NIFKQ9BYG3 293 aaKnown RBP17.23■□□□□ 0.35
COL6A1-206ENST00000498614 SMG5Q9UPR3 1016 aaKnown RBP17.23■□□□□ 0.35
COL6A1-206ENST00000498614 DPPA5A6NC42 116 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 PI4K2BG5E9Z4 385 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 DNALI1O14645 258 aaPredicted RBP17.22■□□□□ 0.35
COL6A1-206ENST00000498614 CST3P01034 146 aaPredicted RBP17.22■□□□□ 0.35
COL6A1-206ENST00000498614 KRT10P13645 584 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 TCF4P15884 667 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 TBXAS1P24557 533 aaPredicted RBP17.22■□□□□ 0.35
COL6A1-206ENST00000498614 SLC18A1P54219 525 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 RPL7AP62424 266 aaKnown RBP17.22■□□□□ 0.35
COL6A1-206ENST00000498614 DNERQ8NFT8 737 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 FOXP3Q9BZS1 431 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 VPS37BQ9H9H4 285 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 CYLDQ9NQC7 956 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 DNPEPQ9ULA0 475 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 SPDYE5A6NIY4 337 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 TYROBPO43914 113 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 PDHA1P08559 390 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 ATP6V1C1P21283 382 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 PTDSS1P48651 473 aaKnown RBP17.22■□□□□ 0.35
COL6A1-206ENST00000498614 TUBP50607 506 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 ZNF394Q53GI3 561 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 WASHC2DQ5SRD0 308 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 ZFYVE27Q5T4F4 411 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 HHATQ5VTY9 493 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 KAZNQ674X7 775 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 EEPD1Q7L9B9 569 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 FEZF2Q8TBJ5 459 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 ZNF606Q8WXB4 792 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 MAK16Q9BXY0 300 aaKnown RBP17.22■□□□□ 0.35
COL6A1-206ENST00000498614 SCINQ9Y6U3 715 aa17.22■□□□□ 0.35
COL6A1-206ENST00000498614 IGKV6D-21A0A0A0MT36 114 aa17.21■□□□□ 0.35
COL6A1-206ENST00000498614 LIASO43766 372 aa17.21■□□□□ 0.35
COL6A1-206ENST00000498614 ADCY3O60266 1144 aa17.21■□□□□ 0.35
COL6A1-206ENST00000498614 FARP2O94887 1054 aaPredicted RBP17.21■□□□□ 0.35
COL6A1-206ENST00000498614 NLRP9Q7RTR0 991 aa17.21■□□□□ 0.35
COL6A1-206ENST00000498614 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.21■□□□□ 0.35
COL6A1-206ENST00000498614 CHST13Q8NET6 341 aa17.21■□□□□ 0.35
COL6A1-206ENST00000498614 EXD1Q8NHP7 514 aa17.21■□□□□ 0.35
COL6A1-206ENST00000498614 ZNF75CPQ92670 426 aaPredicted RBP17.21■□□□□ 0.35
COL6A1-206ENST00000498614 VCPIP1Q96JH7 1222 aa17.21■□□□□ 0.35
COL6A1-206ENST00000498614 TCHPQ9BT92 498 aa17.21■□□□□ 0.35
COL6A1-206ENST00000498614 IMPG2Q9BZV3 1241 aa17.21■□□□□ 0.35
COL6A1-206ENST00000498614 MTMR12Q9C0I1 747 aa17.21■□□□□ 0.35
COL6A1-206ENST00000498614 NPHS2Q9NP85 383 aa17.21■□□□□ 0.35
COL6A1-206ENST00000498614 CNTN6Q9UQ52 1028 aa17.21■□□□□ 0.35
COL6A1-206ENST00000498614 LOC285556D6RIA3 1793 aa17.21■□□□□ 0.35
COL6A1-206ENST00000498614 TRAFD1O14545 582 aaPredicted RBP17.21■□□□□ 0.34
COL6A1-206ENST00000498614 KIF3CO14782 793 aa17.21■□□□□ 0.34
COL6A1-206ENST00000498614 CTCFP49711 727 aaPredicted RBP17.21■□□□□ 0.34
COL6A1-206ENST00000498614 ARSEP51690 589 aa17.21■□□□□ 0.34
COL6A1-206ENST00000498614 STAT5BP51692 787 aa17.21■□□□□ 0.34
COL6A1-206ENST00000498614 C1QBPQ07021 282 aaKnown RBP17.21■□□□□ 0.34
COL6A1-206ENST00000498614 GPS1Q13098 491 aa17.21■□□□□ 0.34
COL6A1-206ENST00000498614 MAPK6Q16659 721 aa17.21■□□□□ 0.34
COL6A1-206ENST00000498614 CCDC142Q17RM4 750 aa17.21■□□□□ 0.34
COL6A1-206ENST00000498614 PLEKHG4Q58EX7 1191 aa17.21■□□□□ 0.34
COL6A1-206ENST00000498614 RFWD3Q6PCD5 774 aa17.21■□□□□ 0.34
COL6A1-206ENST00000498614 LVRNQ6Q4G3 990 aa17.21■□□□□ 0.34
COL6A1-206ENST00000498614 CEP128Q6ZU80 1094 aa17.21■□□□□ 0.34
COL6A1-206ENST00000498614 MTDHQ86UE4 582 aaKnown RBP17.21■□□□□ 0.34
COL6A1-206ENST00000498614 C2orf69Q8N8R5 385 aa17.21■□□□□ 0.34
COL6A1-206ENST00000498614 PRPF31Q8WWY3 499 aaKnown RBP17.21■□□□□ 0.34
COL6A1-206ENST00000498614 TTC25Q96NG3 672 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms