RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-211ENST00000498562 PARD6AQ9NPB6 346 aa27.78■■■□□ 2.04
CUL4A-211ENST00000498562 TDP1Q9NUW8 608 aa27.78■■■□□ 2.04
CUL4A-211ENST00000498562 UXTQ9UBK9 157 aaPredicted RBP27.78■■■□□ 2.04
CUL4A-211ENST00000498562 RAB23Q9ULC3 237 aa27.78■■■□□ 2.04
CUL4A-211ENST00000498562 SPTLC2O15270 562 aa27.77■■■□□ 2.04
CUL4A-211ENST00000498562 PPP6R2O75170 966 aa27.77■■■□□ 2.04
CUL4A-211ENST00000498562 LHX1P48742 406 aa27.77■■■□□ 2.04
CUL4A-211ENST00000498562 CFAP221Q4G0U5 840 aa27.77■■■□□ 2.04
CUL4A-211ENST00000498562 TRIM68Q6AZZ1 485 aa27.77■■■□□ 2.04
CUL4A-211ENST00000498562 STXBP4Q6ZWJ1 553 aa27.77■■■□□ 2.04
CUL4A-211ENST00000498562 MON1AQ86VX9 555 aa27.77■■■□□ 2.04
CUL4A-211ENST00000498562 CBWD2Q8IUF1 395 aa27.77■■■□□ 2.04
CUL4A-211ENST00000498562 USP18Q9UMW8 372 aa27.77■■■□□ 2.04
CUL4A-211ENST00000498562 GREB1Q4ZG55 1949 aa27.77■■■□□ 2.04
CUL4A-211ENST00000498562 ANAPC1Q9H1A4 1944 aa27.77■■■□□ 2.04
CUL4A-211ENST00000498562 OTOL1A6NHN0 477 aaPredicted RBP27.76■■■□□ 2.03
CUL4A-211ENST00000498562 PCSK1P29120 753 aa27.76■■■□□ 2.03
CUL4A-211ENST00000498562 HOXD13P35453 343 aa27.76■■■□□ 2.03
CUL4A-211ENST00000498562 RUNX3Q13761 415 aa27.76■■■□□ 2.03
CUL4A-211ENST00000498562 ZNF268Q14587 947 aaPredicted RBP27.76■■■□□ 2.03
CUL4A-211ENST00000498562 PRR23BQ6ZRT6 265 aa27.76■■■□□ 2.03
CUL4A-211ENST00000498562 LIMS2Q7Z4I7 341 aa27.76■■■□□ 2.03
CUL4A-211ENST00000498562 LONP2Q86WA8 852 aa27.76■■■□□ 2.03
CUL4A-211ENST00000498562 FUBP3Q96I24 572 aaKnown RBP eCLIP27.76■■■□□ 2.03
CUL4A-211ENST00000498562 MYRFLQ96LU7 910 aa27.76■■■□□ 2.03
CUL4A-211ENST00000498562 BACH2Q9BYV9 841 aa27.76■■■□□ 2.03
CUL4A-211ENST00000498562 LRRC27Q9C0I9 530 aa27.76■■■□□ 2.03
CUL4A-211ENST00000498562 CUEDC2Q9H467 287 aa27.76■■■□□ 2.03
CUL4A-211ENST00000498562 EBF3Q9H4W6 596 aa27.76■■■□□ 2.03
CUL4A-211ENST00000498562 HSPBP1Q9NZL4 362 aa27.76■■■□□ 2.03
CUL4A-211ENST00000498562 PTPRDP23468 1912 aa27.75■■■□□ 2.03
CUL4A-211ENST00000498562 ZNF233A6NK53 670 aa27.75■■■□□ 2.03
CUL4A-211ENST00000498562 HRO43593 1189 aa27.75■■■□□ 2.03
CUL4A-211ENST00000498562 LMNB2Q03252 620 aa27.75■■■□□ 2.03
CUL4A-211ENST00000498562 MYO1EQ12965 1108 aa27.75■■■□□ 2.03
CUL4A-211ENST00000498562 SRSF5Q13243 272 aaKnown RBP27.75■■■□□ 2.03
CUL4A-211ENST00000498562 DPH6Q7L8W6 267 aa27.75■■■□□ 2.03
CUL4A-211ENST00000498562 SPATA2LQ8IUW3 424 aaPredicted RBP27.75■■■□□ 2.03
CUL4A-211ENST00000498562 KBTBD7Q8WVZ9 684 aa27.75■■■□□ 2.03
CUL4A-211ENST00000498562 EIF3DO15371 548 aaKnown RBP eCLIP27.74■■■□□ 2.03
CUL4A-211ENST00000498562 TNNC2P02585 160 aa27.74■■■□□ 2.03
CUL4A-211ENST00000498562 HOXC13P31276 330 aa27.74■■■□□ 2.03
CUL4A-211ENST00000498562 CNR2P34972 360 aa27.74■■■□□ 2.03
CUL4A-211ENST00000498562 SIM2Q14190 667 aaPredicted RBP27.74■■■□□ 2.03
CUL4A-211ENST00000498562 SURF1Q15526 300 aa27.74■■■□□ 2.03
CUL4A-211ENST00000498562 TMEM196Q5HYL7 178 aa27.74■■■□□ 2.03
CUL4A-211ENST00000498562 FAM171BQ6P995 826 aa27.74■■■□□ 2.03
CUL4A-211ENST00000498562 EPM2AIP1Q7L775 607 aaPredicted RBP27.74■■■□□ 2.03
CUL4A-211ENST00000498562 DHX58Q96C10 678 aa27.74■■■□□ 2.03
CUL4A-211ENST00000498562 HPDLQ96IR7 371 aa27.74■■■□□ 2.03
CUL4A-211ENST00000498562 TFIP11Q9UBB9 837 aaKnown RBP27.74■■■□□ 2.03
CUL4A-211ENST00000498562 PRR5-ARHGAP8B1AHC4 643 aa27.73■■■□□ 2.03
CUL4A-211ENST00000498562 RETP07949 1114 aa27.73■■■□□ 2.03
CUL4A-211ENST00000498562 ARSAP15289 507 aa27.73■■■□□ 2.03
CUL4A-211ENST00000498562 ASIC1P78348 528 aa27.73■■■□□ 2.03
CUL4A-211ENST00000498562 ARHGAP8P85298 464 aa27.73■■■□□ 2.03
CUL4A-211ENST00000498562 SPEM2Q0P670 501 aa27.73■■■□□ 2.03
CUL4A-211ENST00000498562 HEATR6Q6AI08 1181 aaKnown RBP27.73■■■□□ 2.03
CUL4A-211ENST00000498562 FSTL4Q6MZW2 842 aa27.73■■■□□ 2.03
CUL4A-211ENST00000498562 CNNM4Q6P4Q7 775 aa27.73■■■□□ 2.03
CUL4A-211ENST00000498562 PKN3Q6P5Z2 889 aa27.73■■■□□ 2.03
CUL4A-211ENST00000498562 SHC4Q6S5L8 630 aa27.73■■■□□ 2.03
CUL4A-211ENST00000498562 WDR49Q8IV35 697 aa27.73■■■□□ 2.03
CUL4A-211ENST00000498562 ZNF396Q96N95 335 aaPredicted RBP27.73■■■□□ 2.03
CUL4A-211ENST00000498562 SYT15Q9BQS2 421 aa27.73■■■□□ 2.03
CUL4A-211ENST00000498562 R3HCC1Q9Y3T6 440 aaKnown RBP27.73■■■□□ 2.03
CUL4A-211ENST00000498562 HELZP42694 1942 aaKnown RBP27.73■■■□□ 2.03
CUL4A-211ENST00000498562 ATP2C2O75185 946 aa27.72■■■□□ 2.03
CUL4A-211ENST00000498562 YEATS4O95619 227 aa27.72■■■□□ 2.03
CUL4A-211ENST00000498562 SDHBP21912 280 aa27.72■■■□□ 2.03
CUL4A-211ENST00000498562 HOXA6P31267 233 aa27.72■■■□□ 2.03
CUL4A-211ENST00000498562 MAGEA11P43364 429 aa27.72■■■□□ 2.03
CUL4A-211ENST00000498562 PSMC1P62191 440 aaKnown RBP27.72■■■□□ 2.03
CUL4A-211ENST00000498562 AMPD3Q01432 767 aa27.72■■■□□ 2.03
CUL4A-211ENST00000498562 FAM160A1Q05DH4 1040 aa27.72■■■□□ 2.03
CUL4A-211ENST00000498562 DUOXA2Q1HG44 320 aa27.72■■■□□ 2.03
CUL4A-211ENST00000498562 FAM26FQ5R3K3 315 aa27.72■■■□□ 2.03
CUL4A-211ENST00000498562 SCN4BQ8IWT1 228 aa27.72■■■□□ 2.03
CUL4A-211ENST00000498562 ZNF507Q8TCN5 953 aa27.72■■■□□ 2.03
CUL4A-211ENST00000498562 KIAA1586Q9HCI6 787 aa27.72■■■□□ 2.03
CUL4A-211ENST00000498562 TRDMT1O14717 391 aaKnown RBP27.71■■■□□ 2.03
CUL4A-211ENST00000498562 TGFB1I1O43294 461 aa27.71■■■□□ 2.03
CUL4A-211ENST00000498562 CUTAO60888 179 aa27.71■■■□□ 2.03
CUL4A-211ENST00000498562 LMO2P25791 158 aa27.71■■■□□ 2.03
CUL4A-211ENST00000498562 USP4Q13107 963 aa27.71■■■□□ 2.03
CUL4A-211ENST00000498562 MTF1Q14872 753 aa27.71■■■□□ 2.03
CUL4A-211ENST00000498562 ZNF77Q15935 545 aa27.71■■■□□ 2.03
CUL4A-211ENST00000498562 CC2D1AQ6P1N0 951 aaPredicted RBP27.71■■■□□ 2.03
CUL4A-211ENST00000498562 C4orf50Q6ZRC1 276 aa27.71■■■□□ 2.03
CUL4A-211ENST00000498562 WDR5BQ86VZ2 330 aa27.71■■■□□ 2.03
CUL4A-211ENST00000498562 MYLPFQ96A32 169 aa27.71■■■□□ 2.03
CUL4A-211ENST00000498562 SLC22A12Q96S37 553 aa27.71■■■□□ 2.03
CUL4A-211ENST00000498562 TRPC7Q9HCX4 862 aa27.71■■■□□ 2.03
CUL4A-211ENST00000498562 CRTAC1Q9NQ79 661 aa27.71■■■□□ 2.03
CUL4A-211ENST00000498562 CDH9Q9ULB4 789 aa27.71■■■□□ 2.03
CUL4A-211ENST00000498562 LRP3O75074 770 aa27.7■■■□□ 2.02
CUL4A-211ENST00000498562 WARSP23381 471 aaKnown RBP27.7■■■□□ 2.02
CUL4A-211ENST00000498562 ATXN1P54253 815 aaKnown RBP27.7■■■□□ 2.02
CUL4A-211ENST00000498562 EHHADHQ08426 723 aa27.7■■■□□ 2.02
CUL4A-211ENST00000498562 GRSF1Q12849 480 aaKnown RBP eCLIP27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms