RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 MTSS1LQ765P7 747 aa12.51□□□□□ -0.41
MRPL55-234ENST00000497758 UNC93AQ86WB7 457 aa12.51□□□□□ -0.41
MRPL55-234ENST00000497758 TTC39CQ8N584 583 aa12.51□□□□□ -0.41
MRPL55-234ENST00000497758 GPR152Q8TDT2 470 aa12.51□□□□□ -0.41
MRPL55-234ENST00000497758 NXPE3Q969Y0 559 aa12.51□□□□□ -0.41
MRPL55-234ENST00000497758 TCEAL4Q96EI5 215 aa12.51□□□□□ -0.41
MRPL55-234ENST00000497758 PCED1BQ96HM7 432 aa12.51□□□□□ -0.41
MRPL55-234ENST00000497758 MED10Q9BTT4 135 aa12.51□□□□□ -0.41
MRPL55-234ENST00000497758 C1QTNF1Q9BXJ1 281 aa12.51□□□□□ -0.41
MRPL55-234ENST00000497758 BCO2Q9BYV7 579 aa12.51□□□□□ -0.41
MRPL55-234ENST00000497758 ELOVL4Q9GZR5 314 aa12.51□□□□□ -0.41
MRPL55-234ENST00000497758 SDCBP2Q9H190 292 aa12.51□□□□□ -0.41
MRPL55-234ENST00000497758 EPHX3Q9H6B9 360 aa12.51□□□□□ -0.41
MRPL55-234ENST00000497758 KCNK12Q9HB15 430 aa12.51□□□□□ -0.41
MRPL55-234ENST00000497758 APOBEC3GQ9HC16 384 aaKnown RBP12.51□□□□□ -0.41
MRPL55-234ENST00000497758 A0A1W2PRU2 124 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 TRIM66O15016 1216 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 AFPP02771 609 aaKnown RBP12.5□□□□□ -0.41
MRPL55-234ENST00000497758 CSH1P0DML2 217 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 CSH2P0DML3 217 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 GABRR2P28476 465 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 CDC25CP30307 473 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 CCR2P41597 374 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 GPR15P49685 360 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 MARSP56192 900 aaKnown RBP12.5□□□□□ -0.41
MRPL55-234ENST00000497758 TDGQ13569 410 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 DDR2Q16832 855 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 ARHGAP15Q53QZ3 475 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 PRSS36Q5K4E3 855 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 SDHAF4Q5VUM1 108 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 RBM43Q6ZSC3 357 aaKnown RBP12.5□□□□□ -0.41
MRPL55-234ENST00000497758 ACOT1Q86TX2 421 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 FAM114A1Q8IWE2 563 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 TRIM59Q8IWR1 403 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 UBALD2Q8IYN6 164 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 MCRS1Q96EZ8 462 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 FAXDC2Q96IV6 333 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 CNOT6LQ96LI5 555 aaKnown RBP12.5□□□□□ -0.41
MRPL55-234ENST00000497758 NT5C1AQ9BXI3 368 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 ATXN3LQ9H3M9 355 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 MAGED2Q9UNF1 606 aaPredicted RBP12.5□□□□□ -0.41
MRPL55-234ENST00000497758 COQ4Q9Y3A0 265 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 NME7Q9Y5B8 376 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 DOCK6Q96HP0 2047 aa12.5□□□□□ -0.41
MRPL55-234ENST00000497758 P4HA2O15460 535 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 LRRN2O75325 713 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 GJA1P17302 382 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 MTIF2P46199 727 aaKnown RBP12.49□□□□□ -0.41
MRPL55-234ENST00000497758 YWHAEP62258 255 aaKnown RBP12.49□□□□□ -0.41
MRPL55-234ENST00000497758 ZXDAP98168 799 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 INCA1Q0VD86 236 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 KCNH2Q12809 1159 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 LRMPQ12912 555 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 ORC1Q13415 861 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 HTR4Q13639 388 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 TEAD2Q15562 447 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 CT47A1Q5JQC4 288 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-234ENST00000497758 TMC8Q8IU68 726 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 SHKBP1Q8TBC3 707 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 RSAD2Q8WXG1 361 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 EDAQ92838 391 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 B3GNT5Q9BYG0 378 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 ZNF518BQ9C0D4 1074 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 GPR88Q9GZN0 384 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 THAP9Q9H5L6 903 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 ZNF334Q9HCZ1 680 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-234ENST00000497758 UXTQ9UBK9 157 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-234ENST00000497758 HMGXB4Q9UGU5 601 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 NUMBLQ9Y6R0 609 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 DOCK8Q8NF50 2099 aa12.49□□□□□ -0.41
MRPL55-234ENST00000497758 SLC38A8A6NNN8 435 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 ANHXE9PGG2 379 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 F8VP50 259 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 CLDN5O00501 218 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 PMM2O15305 246 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 CILPO75339 1184 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 TBXAS1P24557 533 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-234ENST00000497758 CUL2Q13617 745 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 STX1AQ16623 288 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 TMEM31Q5JXX7 168 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 PARM1Q6UWI2 310 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 FAM35AQ86V20 835 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 CRYBG2Q8N1P7 616 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 STKLD1Q8NE28 680 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 ST13P5Q8NFI4 369 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-234ENST00000497758 TATDN2Q93075 761 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 SMARCD1Q96GM5 515 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 SPATA17Q96L03 361 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 CEP295NLQ96MC4 621 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 NT5C1BQ96P26 610 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 ARID3AQ99856 593 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 KXD1Q9BQD3 176 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 LRRC3Q9BY71 257 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 FAM124BQ9H5Z6 455 aaPredicted RBP12.48□□□□□ -0.41
MRPL55-234ENST00000497758 KRT82Q9NSB4 513 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 CISHQ9NSE2 258 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 FAM49BQ9NUQ9 324 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 ANO10Q9NW15 660 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 EHD2Q9NZN4 543 aa12.48□□□□□ -0.41
MRPL55-234ENST00000497758 FAM86C2PA6NEL3 165 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms