RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 CDK11BP21127 795 aaKnown RBP17.26■□□□□ 0.35
FAM3A-220ENST00000497506 ACO1P21399 889 aaKnown RBP17.26■□□□□ 0.35
FAM3A-220ENST00000497506 MAGEA11P43364 429 aa17.26■□□□□ 0.35
FAM3A-220ENST00000497506 ALDH1A3P47895 512 aa17.26■□□□□ 0.35
FAM3A-220ENST00000497506 COPB1P53618 953 aaKnown RBP17.26■□□□□ 0.35
FAM3A-220ENST00000497506 CYP27A1Q02318 531 aa17.26■□□□□ 0.35
FAM3A-220ENST00000497506 APBA1Q02410 837 aa17.26■□□□□ 0.35
FAM3A-220ENST00000497506 GCNT1Q02742 428 aa17.26■□□□□ 0.35
FAM3A-220ENST00000497506 KCNMA1Q12791 1236 aa17.26■□□□□ 0.35
FAM3A-220ENST00000497506 MGAT5BQ3V5L5 792 aa17.26■□□□□ 0.35
FAM3A-220ENST00000497506 TJAP1Q5JTD0 557 aa17.26■□□□□ 0.35
FAM3A-220ENST00000497506 DPY19L2P1Q6NXN4 242 aa17.26■□□□□ 0.35
FAM3A-220ENST00000497506 PAQR9Q6ZVX9 377 aa17.26■□□□□ 0.35
FAM3A-220ENST00000497506 RRAGAQ7L523 313 aa17.26■□□□□ 0.35
FAM3A-220ENST00000497506 GRASPQ7Z6J2 395 aaPredicted RBP17.26■□□□□ 0.35
FAM3A-220ENST00000497506 KREMEN1Q96MU8 473 aa17.26■□□□□ 0.35
FAM3A-220ENST00000497506 WDR6Q9NNW5 1121 aaKnown RBP17.26■□□□□ 0.35
FAM3A-220ENST00000497506 SIX2Q9NPC8 291 aa17.26■□□□□ 0.35
FAM3A-220ENST00000497506 HCFC1R1Q9NWW0 138 aa17.26■□□□□ 0.35
FAM3A-220ENST00000497506 DNMT3BQ9UBC3 853 aaKnown RBP17.26■□□□□ 0.35
FAM3A-220ENST00000497506 C5orf42Q9H799 3197 aa17.25■□□□□ 0.35
FAM3A-220ENST00000497506 BECN2A8MW95 431 aa17.25■□□□□ 0.35
FAM3A-220ENST00000497506 CLDN5O00501 218 aa17.25■□□□□ 0.35
FAM3A-220ENST00000497506 PES1O00541 588 aaKnown RBP17.25■□□□□ 0.35
FAM3A-220ENST00000497506 BDNFP23560 247 aa17.25■□□□□ 0.35
FAM3A-220ENST00000497506 RAD23BP54727 409 aa17.25■□□□□ 0.35
FAM3A-220ENST00000497506 EPHB3P54753 998 aa17.25■□□□□ 0.35
FAM3A-220ENST00000497506 YWHAEP62258 255 aaKnown RBP17.25■□□□□ 0.35
FAM3A-220ENST00000497506 NTHL1P78549 312 aa17.25■□□□□ 0.35
FAM3A-220ENST00000497506 PLD1Q13393 1074 aa17.25■□□□□ 0.35
FAM3A-220ENST00000497506 ZNF394Q53GI3 561 aa17.25■□□□□ 0.35
FAM3A-220ENST00000497506 GJB7Q6PEY0 223 aa17.25■□□□□ 0.35
FAM3A-220ENST00000497506 LRSAM1Q6UWE0 723 aa17.25■□□□□ 0.35
FAM3A-220ENST00000497506 LUZP1Q86V48 1076 aa17.25■□□□□ 0.35
FAM3A-220ENST00000497506 C12orf29Q8N999 325 aa17.25■□□□□ 0.35
FAM3A-220ENST00000497506 SLC4A11Q8NBS3 891 aa17.25■□□□□ 0.35
FAM3A-220ENST00000497506 UBE2TQ9NPD8 197 aaPredicted RBP17.25■□□□□ 0.35
FAM3A-220ENST00000497506 CLUHO75153 1309 aa17.24■□□□□ 0.35
FAM3A-220ENST00000497506 TPM2P07951 284 aa17.24■□□□□ 0.35
FAM3A-220ENST00000497506 PTPN2P17706 415 aa17.24■□□□□ 0.35
FAM3A-220ENST00000497506 GPR15P49685 360 aa17.24■□□□□ 0.35
FAM3A-220ENST00000497506 DDR2Q16832 855 aa17.24■□□□□ 0.35
FAM3A-220ENST00000497506 VSTM1Q6UX27 236 aa17.24■□□□□ 0.35
FAM3A-220ENST00000497506 FUKQ8N0W3 1084 aa17.24■□□□□ 0.35
FAM3A-220ENST00000497506 ANKRD20A12PQ8NF67 263 aa17.24■□□□□ 0.35
FAM3A-220ENST00000497506 TMEM176AQ96HP8 235 aa17.24■□□□□ 0.35
FAM3A-220ENST00000497506 ZNF512Q96ME7 567 aaPredicted RBP17.24■□□□□ 0.35
FAM3A-220ENST00000497506 PHF7Q9BWX1 381 aaPredicted RBP17.24■□□□□ 0.35
FAM3A-220ENST00000497506 LRRC3Q9BY71 257 aa17.24■□□□□ 0.35
FAM3A-220ENST00000497506 ZNF518BQ9C0D4 1074 aa17.24■□□□□ 0.35
FAM3A-220ENST00000497506 TMEM30AQ9NV96 361 aa17.24■□□□□ 0.35
FAM3A-220ENST00000497506 APEX2Q9UBZ4 518 aa17.24■□□□□ 0.35
FAM3A-220ENST00000497506 ASB3Q9Y575 518 aa17.24■□□□□ 0.35
FAM3A-220ENST00000497506 GREB1Q4ZG55 1949 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 LGALS16A8MUM7 142 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 RHOP08100 348 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 CCDC130P13994 396 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 CACNA2D1P54289 1103 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 RPL10AP62906 217 aaKnown RBP17.23■□□□□ 0.35
FAM3A-220ENST00000497506 PABPC1LQ4VXU2 614 aaKnown RBP17.23■□□□□ 0.35
FAM3A-220ENST00000497506 SDHAF4Q5VUM1 108 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 DNAJB7Q7Z6W7 309 aaPredicted RBP17.23■□□□□ 0.35
FAM3A-220ENST00000497506 FAM35AQ86V20 835 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 HS6ST3Q8IZP7 471 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 ELMOD1Q8N336 334 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 FAM200AQ8TCP9 573 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 SLC2A14Q8TDB8 520 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 GPR152Q8TDT2 470 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 GIPC2Q8TF65 315 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 PSMG2Q969U7 264 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 JAKMIP2Q96AA8 810 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 HNRNPABQ99729 332 aaKnown RBP17.23■□□□□ 0.35
FAM3A-220ENST00000497506 CORO1BQ9BR76 489 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 TSPY26PQ9H489 355 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 AVENQ9NQS1 362 aaPredicted RBP17.23■□□□□ 0.35
FAM3A-220ENST00000497506 FAM49BQ9NUQ9 324 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 PRKAG3Q9UGI9 489 aa17.23■□□□□ 0.35
FAM3A-220ENST00000497506 DOCK8Q8NF50 2099 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 RNF225M0QZC1 329 aaPredicted RBP17.22■□□□□ 0.35
FAM3A-220ENST00000497506 EPHA5P54756 1037 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 ZNF445P59923 1031 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 IQCEQ6IPM2 695 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 TMEM270Q6UE05 265 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 ENOSF1Q7L5Y1 443 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 TMC8Q8IU68 726 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 SCN4BQ8IWT1 228 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 ADHFE1Q8IWW8 467 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 STKLD1Q8NE28 680 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 CYFIP2Q96F07 1278 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 C8orf48Q96LL4 319 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 FAM81BQ96LP2 452 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 HEXIM2Q96MH2 286 aaKnown RBP17.22■□□□□ 0.35
FAM3A-220ENST00000497506 MED10Q9BTT4 135 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 DNAI2Q9GZS0 605 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 AJAP1Q9UKB5 411 aaPredicted RBP17.22■□□□□ 0.35
FAM3A-220ENST00000497506 CNTN6Q9UQ52 1028 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 PCDHB4Q9Y5E5 795 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 MYH10P35580 1976 aa17.22■□□□□ 0.35
FAM3A-220ENST00000497506 HMGA1P17096 107 aaKnown RBP17.21■□□□□ 0.35
FAM3A-220ENST00000497506 TRIM21P19474 475 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms