RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CHORDC1Q9UHD1 332 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-224ENST00000497488 NAALADL1Q9UQQ1 740 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 KNSTRNQ9Y448 316 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 ADAMTS12P58397 1594 aa6.68□□□□□ -1.34
BRCA1-224ENST00000497488 CLASP1Q7Z460 1538 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 PTGES3LE9PB15 166 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 PRAMEF4O60810 478 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 GPR32O75388 356 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 LY86O95711 162 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 CD1AP06126 327 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 ELNP15502 786 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 STMN1P16949 149 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 KIF5BP33176 963 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 HADHAP40939 763 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 DPP6P42658 865 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 MCM2P49736 904 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 ADAM15Q13444 863 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 MTM1Q13496 603 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 SEC23BQ15437 767 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 PRAMEF14Q5SWL7 426 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 NAA35Q5VZE5 725 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 MCTP2Q6DN12 878 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 ANO7Q6IWH7 933 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 TATDN1Q6P1N9 297 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 LRRC8DQ7L1W4 858 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 CEP97Q8IW35 865 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 TAGAPQ8N103 731 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 SLC15A4Q8N697 577 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 PCSK9Q8NBP7 692 aaKnown RBP6.67□□□□□ -1.34
BRCA1-224ENST00000497488 OR5AN1Q8NGI8 311 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 SLC22A17Q8WUG5 538 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 ZFPM2Q8WW38 1151 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 GATA6Q92908 595 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 SPSB4Q96A44 273 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 ZNF845Q96IR2 970 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-224ENST00000497488 AP5M1Q9H0R1 490 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 VPS16Q9H269 839 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 LDAHQ9H6V9 325 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 SLAMF7Q9NQ25 335 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 PDRG1Q9NUG6 133 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 PLA2G3Q9NZ20 509 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 RASAL2Q9UJF2 1139 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 GTF3C4Q9UKN8 822 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 CAPN11Q9UMQ6 739 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 CAMK2AQ9UQM7 478 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 RIMBP3CA6NJZ7 1639 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 RIMBP3BA6NNM3 1639 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 RIMBP3Q9UFD9 1639 aa6.67□□□□□ -1.34
BRCA1-224ENST00000497488 ARHGEF11O15085 1522 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 STX16-NPEPL1H3BU86 382 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 SH2B2O14492 632 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-224ENST00000497488 STX16O14662 325 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 ARHGEF15O94989 841 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 GOSR1O95249 250 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 ESR1P03372 595 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 ATF7P17544 494 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-224ENST00000497488 ACVR2AP27037 513 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 TM4SF1P30408 202 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 PGM1P36871 562 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 RGS2P41220 211 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 SLC11A2P49281 568 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 CLCN2P51788 898 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 NOMO3P69849 1222 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 CD69Q07108 199 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 PUM1Q14671 1186 aaKnown RBP eCLIP6.66□□□□□ -1.34
BRCA1-224ENST00000497488 TBCCQ15814 346 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 PRICKLE4Q2TBC4 344 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 BTBD16Q32M84 506 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 TRIM60Q495X7 471 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 C19orf54Q5BKX5 351 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 CD276Q5ZPR3 534 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 MRNIPQ6NTE8 343 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 CPLX2Q6PUV4 134 aaKnown RBP6.66□□□□□ -1.34
BRCA1-224ENST00000497488 CCDC91Q7Z6B0 441 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-224ENST00000497488 IRF2BP1Q8IU81 584 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 SPACA3Q8IXA5 215 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 OR7D4Q8NG98 312 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 MYRFLQ96LU7 910 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 NOX5Q96PH1 765 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 UHRF1Q96T88 793 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-224ENST00000497488 FUZQ9BT04 418 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 G6PC3Q9BUM1 346 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 METTL22Q9BUU2 404 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-224ENST00000497488 MUC13Q9H3R2 512 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 RABEP2Q9H5N1 569 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 SLC39A2Q9NP94 309 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 LANCL2Q9NS86 450 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 GALNT8Q9NY28 637 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 IMPACTQ9P2X3 320 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 MORF4L1Q9UBU8 362 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 MAFFQ9ULX9 164 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 SIT1Q9Y3P8 196 aa6.66□□□□□ -1.34
BRCA1-224ENST00000497488 FAM90A18PA6NE21 464 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 FAM90A16PA6NEW6 464 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 PRSS29PA6NIE9 313 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 TTC36A6NLP5 189 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 FAM90A9PA6NNJ1 464 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 FAM90A5PA8MXJ8 464 aa6.65□□□□□ -1.34
BRCA1-224ENST00000497488 RAB27BO00194 218 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms