RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 SLC8A3P57103 927 aa20.94■□□□□ 0.94
SCAMP3-209ENST00000497470 ZNF697Q5TEC3 545 aa20.94■□□□□ 0.94
SCAMP3-209ENST00000497470 WDR59Q6PJI9 974 aa20.94■□□□□ 0.94
SCAMP3-209ENST00000497470 TMTC1Q8IUR5 882 aa20.94■□□□□ 0.94
SCAMP3-209ENST00000497470 CCDC170Q8IYT3 715 aa20.94■□□□□ 0.94
SCAMP3-209ENST00000497470 CCDC112Q8NEF3 446 aa20.94■□□□□ 0.94
SCAMP3-209ENST00000497470 MICAL1Q8TDZ2 1067 aa20.94■□□□□ 0.94
SCAMP3-209ENST00000497470 SMARCD1Q96GM5 515 aa20.94■□□□□ 0.94
SCAMP3-209ENST00000497470 DPEP3Q9H4B8 488 aa20.94■□□□□ 0.94
SCAMP3-209ENST00000497470 TRIOBPQ9H2D6 2365 aa20.94■□□□□ 0.94
SCAMP3-209ENST00000497470 WDR27A2RRH5 827 aa20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 MTMR11A4FU01 709 aa20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 ATP2C2O75185 946 aa20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 POU2F2P09086 479 aa20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 GZMAP12544 262 aa20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 CD19P15391 556 aa20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 ACAT1P24752 427 aaKnown RBP20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 BCAT1P54687 386 aa20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 ADKP55263 362 aaKnown RBP20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 MDH1BQ5I0G3 518 aa20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 PPP1R26Q5T8A7 1209 aaPredicted RBP20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 PAQR9Q6ZVX9 377 aa20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 SPATA2LQ8IUW3 424 aaPredicted RBP20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 TFAP2BQ92481 460 aa20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 C8orf48Q96LL4 319 aa20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 DUSP16Q9BY84 665 aa20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 B3GNT5Q9BYG0 378 aa20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 RHOBTB2Q9BYZ6 727 aa20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 TTYH1Q9H313 450 aaPredicted RBP20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 COMMD8Q9NX08 183 aa20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 CEP83Q9Y592 693 aa20.93■□□□□ 0.94
SCAMP3-209ENST00000497470 EPOPA6NHQ4 379 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 C2CD2LO14523 706 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 THAP12O43422 761 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 HOXA9P31269 272 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 RPL34P49207 117 aaKnown RBP20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 SNX16P57768 344 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 PSMC1P62191 440 aaKnown RBP20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 SLC39A12Q504Y0 691 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 E4F1Q66K89 784 aaPredicted RBP20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 CYP26C1Q6V0L0 522 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 TMEM184AQ6ZMB5 413 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 CCDC149Q6ZUS6 474 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 NOP9Q86U38 636 aaKnown RBP20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 C12orf29Q8N999 325 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 MYLPFQ96A32 169 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 HSFY1Q96LI6 401 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 TMEM209Q96SK2 561 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 AGPAT1Q99943 283 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 ZSWIM1Q9BR11 485 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 NSUN3Q9H649 340 aaKnown RBP20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 HAUS4Q9H6D7 363 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 FBXW11Q9UKB1 542 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 TSPAN16Q9UKR8 245 aa20.92■□□□□ 0.94
SCAMP3-209ENST00000497470 HIDE1A8MVS5 230 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 TRIM66O15016 1216 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 NRDCO43847 1150 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 GLUD1P00367 558 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 CYP1A1P04798 512 aaPredicted RBP20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 FAM200BP0CF97 657 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 PNMA6AP0CW24 399 aaPredicted RBP20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 HAPLN1P10915 354 aaPredicted RBP20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 NPR3P17342 541 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 KLRC2P26717 231 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 IRS1P35568 1242 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 CLCN4P51793 760 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 RPL10AP62906 217 aaKnown RBP20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 BST2Q10589 180 aaKnown RBP20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 PLD1Q13393 1074 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 DUSP6Q16828 381 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 PLPP4Q5VZY2 271 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 FAM35AQ86V20 835 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 SPC24Q8NBT2 197 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 SLC30A5Q8TAD4 765 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 SLC2A14Q8TDB8 520 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 GDPD5Q8WTR4 605 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 SLC22A17Q8WUG5 538 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 SLC35F5Q8WV83 523 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 KCTD13Q8WZ19 329 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 SPATA17Q96L03 361 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 MIS12Q9H081 205 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 TMLHEQ9NVH6 421 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 ARHGAP20Q9P2F6 1191 aa20.91■□□□□ 0.94
SCAMP3-209ENST00000497470 XPO1O14980 1071 aaKnown RBP20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 ADAM12O43184 909 aa20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 HCRTO43612 131 aa20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 CLASP2O75122 1294 aaKnown RBP20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 BRD2P25440 801 aaKnown RBP20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 ELF1P32519 619 aa20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 GPD2P43304 727 aa20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 PLA2G4AP47712 749 aa20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 FMO1Q01740 532 aa20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 KCNC3Q14003 757 aa20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 ASTE1Q2TB18 679 aaPredicted RBP20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 HABP4Q5JVS0 413 aaKnown RBP20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 RNF19BQ6ZMZ0 732 aa20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 CCDC186Q7Z3E2 898 aa20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 SCML4Q8N228 414 aa20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 TMEM35BQ8NCS4 154 aa20.9■□□□□ 0.94
SCAMP3-209ENST00000497470 AUTS2Q8WXX7 1259 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms