RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 DNAI2Q9GZS0 605 aa12.24□□□□□ -0.45
HLA-B-254ENST00000497377 CRISPLD1Q9H336 500 aa12.24□□□□□ -0.45
HLA-B-254ENST00000497377 FAM124BQ9H5Z6 455 aaPredicted RBP12.24□□□□□ -0.45
HLA-B-254ENST00000497377 MMRN2Q9H8L6 949 aa12.24□□□□□ -0.45
HLA-B-254ENST00000497377 CYP3A43Q9HB55 503 aa12.24□□□□□ -0.45
HLA-B-254ENST00000497377 ASAH2Q9NR71 780 aa12.24□□□□□ -0.45
HLA-B-254ENST00000497377 RAB20Q9NX57 234 aa12.24□□□□□ -0.45
HLA-B-254ENST00000497377 ABI2Q9NYB9 513 aaPredicted RBP12.24□□□□□ -0.45
HLA-B-254ENST00000497377 GTF3C4Q9UKN8 822 aa12.24□□□□□ -0.45
HLA-B-254ENST00000497377 CDH7Q9ULB5 785 aa12.24□□□□□ -0.45
HLA-B-254ENST00000497377 SLC27A5Q9Y2P5 690 aa12.24□□□□□ -0.45
HLA-B-254ENST00000497377 COQ4Q9Y3A0 265 aa12.24□□□□□ -0.45
HLA-B-254ENST00000497377 MRPS23Q9Y3D9 190 aaKnown RBP12.24□□□□□ -0.45
HLA-B-254ENST00000497377 A8MXQ7 604 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 PI4K2BG5E9Z4 385 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 P4HA2O15460 535 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 DCXO43602 365 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 PDGFRBP09619 1106 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 LAMP2P13473 410 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 SP100P23497 879 aaPredicted RBP12.23□□□□□ -0.45
HLA-B-254ENST00000497377 LMO2P25791 158 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 ERCC5P28715 1186 aaPredicted RBP12.23□□□□□ -0.45
HLA-B-254ENST00000497377 STX17P56962 302 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 RPL10AP62906 217 aaKnown RBP12.23□□□□□ -0.45
HLA-B-254ENST00000497377 NTHL1P78549 312 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 CETN1Q12798 172 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 WDR44Q5JSH3 913 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 VSTM1Q6UX27 236 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 PDZD4Q76G19 769 aaPredicted RBP12.23□□□□□ -0.45
HLA-B-254ENST00000497377 UNC93AQ86WB7 457 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 TTC39CQ8N584 583 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 TTC9BQ8N6N2 239 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 MYCBPAPQ8TBZ2 947 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 PSMG2Q969U7 264 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 MYADMQ96S97 322 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 SEPT5Q99719 369 aaPredicted RBP12.23□□□□□ -0.45
HLA-B-254ENST00000497377 CORO1BQ9BR76 489 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 SRRTQ9BXP5 876 aaKnown RBP12.23□□□□□ -0.45
HLA-B-254ENST00000497377 BCO2Q9BYV7 579 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 NIF3L1Q9GZT8 377 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 SMYD3Q9H7B4 428 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 TMLHEQ9NVH6 421 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 HCFC1R1Q9NWW0 138 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 GDE1Q9NZC3 331 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 CEP72Q9P209 647 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 IGSF9Q9P2J2 1179 aa12.23□□□□□ -0.45
HLA-B-254ENST00000497377 MYO10Q9HD67 2058 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 MYBPHLA2RUH7 354 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 PTPN1P18031 435 aaKnown RBP12.22□□□□□ -0.45
HLA-B-254ENST00000497377 ASPAP45381 313 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 PTPN21Q16825 1174 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 DPCR1Q3MIW9 517 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 CBWD6Q4V339 395 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 CBWD3Q5JTY5 395 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 PRSS36Q5K4E3 855 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 CBWD5Q5RIA9 395 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 SCARA5Q6ZMJ2 495 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 MTSS1LQ765P7 747 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 DNAJB7Q7Z6W7 309 aaPredicted RBP12.22□□□□□ -0.45
HLA-B-254ENST00000497377 TRIM59Q8IWR1 403 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 B3GALNT2Q8NCR0 500 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 FAM200AQ8TCP9 573 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 FGF13Q92913 245 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 PI4K2AQ9BTU6 479 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 GPR88Q9GZN0 384 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 DNAJC25Q9H1X3 360 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 CRTAC1Q9NQ79 661 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 MAGEC2Q9UBF1 373 aaPredicted RBP12.22□□□□□ -0.45
HLA-B-254ENST00000497377 LIMD1Q9UGP4 676 aa12.22□□□□□ -0.45
HLA-B-254ENST00000497377 PTPRDP23468 1912 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 ATP8B3O60423 1300 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 ATP2C2O75185 946 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 CSH1P0DML2 217 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 CSH2P0DML3 217 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 PRKCSHP14314 528 aaPredicted RBP12.21□□□□□ -0.45
HLA-B-254ENST00000497377 ATF6P18850 670 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 PTMSP20962 102 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 FMO5P49326 533 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 CDH8P55286 799 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 PSMC1P62191 440 aaKnown RBP12.21□□□□□ -0.45
HLA-B-254ENST00000497377 INCA1Q0VD86 236 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 MTMR3Q13615 1198 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 TAF12Q16514 161 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 TPD52L1Q16890 204 aaPredicted RBP12.21□□□□□ -0.45
HLA-B-254ENST00000497377 CCDC183Q5T5S1 534 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 SPOPLQ6IQ16 392 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 THSD4Q6ZMP0 1018 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 FAM114A1Q8IWE2 563 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 NPAS3Q8IXF0 933 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 UBALD2Q8IYN6 164 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 CRYBG2Q8N1P7 616 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 ITFG1Q8TB96 612 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 SEMA4DQ92854 862 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 MYLPFQ96A32 169 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 PCED1BQ96HM7 432 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 EPAS1Q99814 870 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 C1QTNF1Q9BXJ1 281 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 ELOVL4Q9GZR5 314 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 SDCBP2Q9H190 292 aa12.21□□□□□ -0.45
HLA-B-254ENST00000497377 APOBEC3GQ9HC16 384 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms