RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 PRKCSHP14314 528 aaPredicted RBP20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 TBXAS1P24557 533 aaPredicted RBP20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 CYP2F1P24903 491 aa20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 CDC25CP30307 473 aa20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 NDST1P52848 882 aa20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 KCNH2Q12809 1159 aa20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 PRSS36Q5K4E3 855 aa20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 SCN4BQ8IWT1 228 aa20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 UBALD2Q8IYN6 164 aa20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 SEMA4DQ92854 862 aa20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 CNOT6LQ96LI5 555 aaKnown RBP20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 C1QTNF1Q9BXJ1 281 aa20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 SDCBP2Q9H190 292 aa20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 APOBEC3GQ9HC16 384 aaKnown RBP20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 ANO10Q9NW15 660 aa20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 UXTQ9UBK9 157 aaPredicted RBP20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 ZMYM5Q9UJ78 669 aa20.5■□□□□ 0.87
CTDSP1-213ENST00000496785 SLC5A9Q2M3M2 681 aa20.49■□□□□ 0.87
CTDSP1-213ENST00000496785 ARHGAP15Q53QZ3 475 aa20.49■□□□□ 0.87
CTDSP1-213ENST00000496785 TMC8Q8IU68 726 aa20.49■□□□□ 0.87
CTDSP1-213ENST00000496785 CREBRFQ8IUR6 639 aa20.49■□□□□ 0.87
CTDSP1-213ENST00000496785 HS6ST3Q8IZP7 471 aa20.49■□□□□ 0.87
CTDSP1-213ENST00000496785 CRYBG2Q8N1P7 616 aa20.49■□□□□ 0.87
CTDSP1-213ENST00000496785 ING5Q8WYH8 240 aa20.49■□□□□ 0.87
CTDSP1-213ENST00000496785 LPIN3Q9BQK8 851 aa20.49■□□□□ 0.87
CTDSP1-213ENST00000496785 NT5C1AQ9BXI3 368 aa20.49■□□□□ 0.87
CTDSP1-213ENST00000496785 DPEP3Q9H4B8 488 aa20.49■□□□□ 0.87
CTDSP1-213ENST00000496785 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.49■□□□□ 0.87
CTDSP1-213ENST00000496785 CEBPBP17676 345 aa20.48■□□□□ 0.87
CTDSP1-213ENST00000496785 BDNFP23560 247 aa20.48■□□□□ 0.87
CTDSP1-213ENST00000496785 GRIK1P39086 918 aa20.48■□□□□ 0.87
CTDSP1-213ENST00000496785 MTIF2P46199 727 aaKnown RBP20.48■□□□□ 0.87
CTDSP1-213ENST00000496785 TDGQ13569 410 aa20.48■□□□□ 0.87
CTDSP1-213ENST00000496785 STX1AQ16623 288 aa20.48■□□□□ 0.87
CTDSP1-213ENST00000496785 GIPC2Q8TF65 315 aa20.48■□□□□ 0.87
CTDSP1-213ENST00000496785 ELMO3Q96BJ8 720 aa20.48■□□□□ 0.87
CTDSP1-213ENST00000496785 SPATA17Q96L03 361 aa20.48■□□□□ 0.87
CTDSP1-213ENST00000496785 NT5C1BQ96P26 610 aa20.48■□□□□ 0.87
CTDSP1-213ENST00000496785 MED10Q9BTT4 135 aa20.48■□□□□ 0.87
CTDSP1-213ENST00000496785 LRRC3Q9BY71 257 aa20.48■□□□□ 0.87
CTDSP1-213ENST00000496785 SLITRK6Q9H5Y7 841 aa20.48■□□□□ 0.87
CTDSP1-213ENST00000496785 KCNK12Q9HB15 430 aa20.48■□□□□ 0.87
CTDSP1-213ENST00000496785 NME7Q9Y5B8 376 aa20.48■□□□□ 0.87
CTDSP1-213ENST00000496785 CUL9Q8IWT3 2517 aa20.47■□□□□ 0.87
CTDSP1-213ENST00000496785 ANHXE9PGG2 379 aa20.47■□□□□ 0.87
CTDSP1-213ENST00000496785 CILPO75339 1184 aa20.47■□□□□ 0.87
CTDSP1-213ENST00000496785 CD58P19256 250 aa20.47■□□□□ 0.87
CTDSP1-213ENST00000496785 GABRR2P28476 465 aa20.47■□□□□ 0.87
CTDSP1-213ENST00000496785 CDR1P51861 262 aa20.47■□□□□ 0.87
CTDSP1-213ENST00000496785 DDR2Q16832 855 aa20.47■□□□□ 0.87
CTDSP1-213ENST00000496785 CCDC142Q17RM4 750 aa20.47■□□□□ 0.87
CTDSP1-213ENST00000496785 ACOT1Q86TX2 421 aa20.47■□□□□ 0.87
CTDSP1-213ENST00000496785 EDAQ92838 391 aa20.47■□□□□ 0.87
CTDSP1-213ENST00000496785 TCEAL4Q96EI5 215 aa20.47■□□□□ 0.87
CTDSP1-213ENST00000496785 MCRS1Q96EZ8 462 aa20.47■□□□□ 0.87
CTDSP1-213ENST00000496785 TRMT2BQ96GJ1 504 aaKnown RBP20.47■□□□□ 0.87
CTDSP1-213ENST00000496785 C8orf48Q96LL4 319 aa20.47■□□□□ 0.87
CTDSP1-213ENST00000496785 A0A1W2PRU2 124 aa20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 NOL4O94818 638 aa20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 ASGR2P07307 311 aa20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 CCR2P41597 374 aa20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 ZXDAP98168 799 aa20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 CUL2Q13617 745 aa20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 HTR4Q13639 388 aa20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 FAM35AQ86V20 835 aa20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 SHKBP1Q8TBC3 707 aa20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 ENOX1Q8TC92 643 aaKnown RBP20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 KHSRPQ92945 711 aaKnown RBP eCLIP20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 SMARCD1Q96GM5 515 aa20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 MED15Q96RN5 788 aa20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 B3GNT5Q9BYG0 378 aa20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 ATXN3LQ9H3M9 355 aa20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 CISHQ9NSE2 258 aa20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 MAGED2Q9UNF1 606 aaPredicted RBP20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 VCANP13611 3396 aa20.46■□□□□ 0.87
CTDSP1-213ENST00000496785 C5orf42Q9H799 3197 aa20.45■□□□□ 0.86
CTDSP1-213ENST00000496785 SLC38A8A6NNN8 435 aa20.45■□□□□ 0.86
CTDSP1-213ENST00000496785 GPR15P49685 360 aa20.45■□□□□ 0.86
CTDSP1-213ENST00000496785 DENND5BQ6ZUT9 1274 aa20.45■□□□□ 0.86
CTDSP1-213ENST00000496785 E2F7Q96AV8 911 aa20.45■□□□□ 0.86
CTDSP1-213ENST00000496785 FAM81BQ96LP2 452 aa20.45■□□□□ 0.86
CTDSP1-213ENST00000496785 MYRFLQ96LU7 910 aa20.45■□□□□ 0.86
CTDSP1-213ENST00000496785 ZNF518BQ9C0D4 1074 aa20.45■□□□□ 0.86
CTDSP1-213ENST00000496785 ZNF334Q9HCZ1 680 aaPredicted RBP20.45■□□□□ 0.86
CTDSP1-213ENST00000496785 DMAP1Q9NPF5 467 aaPredicted RBP20.45■□□□□ 0.86
CTDSP1-213ENST00000496785 NUMBLQ9Y6R0 609 aa20.45■□□□□ 0.86
CTDSP1-213ENST00000496785 DOCK8Q8NF50 2099 aa20.45■□□□□ 0.86
CTDSP1-213ENST00000496785 BDP1A6H8Y1 2624 aa20.45■□□□□ 0.86
CTDSP1-213ENST00000496785 NOTCH4Q99466 2003 aa20.44■□□□□ 0.86
CTDSP1-213ENST00000496785 SOBPA7XYQ1 873 aa20.44■□□□□ 0.86
CTDSP1-213ENST00000496785 F8VP50 259 aa20.44■□□□□ 0.86
CTDSP1-213ENST00000496785 LRRN2O75325 713 aa20.44■□□□□ 0.86
CTDSP1-213ENST00000496785 LETM1O95202 739 aaPredicted RBP20.44■□□□□ 0.86
CTDSP1-213ENST00000496785 HMGA1P17096 107 aaKnown RBP20.44■□□□□ 0.86
CTDSP1-213ENST00000496785 DDX6P26196 483 aaKnown RBP eCLIP20.44■□□□□ 0.865e-6■■■■■ 34.8
CTDSP1-213ENST00000496785 SIGLEC14Q08ET2 396 aa20.44■□□□□ 0.86
CTDSP1-213ENST00000496785 TEAD2Q15562 447 aa20.44■□□□□ 0.86
CTDSP1-213ENST00000496785 MAN2A1Q16706 1144 aa20.44■□□□□ 0.86
CTDSP1-213ENST00000496785 KLHL40Q2TBA0 621 aa20.44■□□□□ 0.86
CTDSP1-213ENST00000496785 CAVIN1Q6NZI2 390 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms