RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 BLZF1Q9H2G9 400 aa13.89□□□□□ -0.19
FN1-226ENST00000496542 MAGEF1Q9HAY2 307 aa13.89□□□□□ -0.19
FN1-226ENST00000496542 ABCB6Q9NP58 842 aa13.89□□□□□ -0.19
FN1-226ENST00000496542 AGPAT3Q9NRZ7 376 aa13.89□□□□□ -0.19
FN1-226ENST00000496542 THG1LQ9NWX6 298 aaKnown RBP13.89□□□□□ -0.19
FN1-226ENST00000496542 NCDNQ9UBB6 729 aa13.89□□□□□ -0.19
FN1-226ENST00000496542 SMG5Q9UPR3 1016 aaKnown RBP13.89□□□□□ -0.19
FN1-226ENST00000496542 CCL26Q9Y258 94 aa13.89□□□□□ -0.19
FN1-226ENST00000496542 UBE4BO95155 1302 aa13.89□□□□□ -0.19
FN1-226ENST00000496542 CLIC2O15247 247 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 LILRB5O75023 590 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 F11P03951 625 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 DLATP10515 647 aaKnown RBP13.88□□□□□ -0.19
FN1-226ENST00000496542 TDGF1P13385 188 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 DDX6P26196 483 aaKnown RBP eCLIP13.88□□□□□ -0.19
FN1-226ENST00000496542 PSMC1P62191 440 aaKnown RBP13.88□□□□□ -0.19
FN1-226ENST00000496542 SATB1Q01826 763 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 PON2Q15165 354 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 SNRNP35Q16560 246 aaKnown RBP13.88□□□□□ -0.19
FN1-226ENST00000496542 ITPRIPL2Q3MIP1 535 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 Q6ZS52 159 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 UNC13DQ70J99 1090 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 WDR49Q8IV35 697 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 SCN4BQ8IWT1 228 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 ZNF507Q8TCN5 953 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 FAM126AQ9BYI3 521 aaPredicted RBP13.88□□□□□ -0.19
FN1-226ENST00000496542 KIAA1586Q9HCI6 787 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 TRPC7Q9HCX4 862 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 FAM13BQ9NYF5 915 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 ZMYM5Q9UJ78 669 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 PCDHA7Q9UN72 937 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 PTPRDP23468 1912 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 ANAPC1Q9H1A4 1944 aa13.88□□□□□ -0.19
FN1-226ENST00000496542 GABRDO14764 452 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 TGFB1I1O43294 461 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 ATP2C2O75185 946 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 TADA3O75528 432 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 NOL4O94818 638 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 TNNI1P19237 187 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 AFMP43652 599 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 CXCL12P48061 93 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 NRLP54845 237 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 CYP24A1Q07973 514 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 PKP1Q13835 747 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 GAS6Q14393 721 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 CFAP221Q4G0U5 840 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 WDR44Q5JSH3 913 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 RESP18Q5W5W9 173 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 HS2ST1Q7LGA3 356 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 TRAPPC11Q7Z392 1133 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 GRAMD1CQ8IYS0 662 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 SPEM1Q8N4L4 309 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 TTC16Q8NEE8 873 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 SCFD1Q8WVM8 642 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 KBTBD7Q8WVZ9 684 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 USP13Q92995 863 aaPredicted RBP13.87□□□□□ -0.19
FN1-226ENST00000496542 MYLPFQ96A32 169 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 CCDC127Q96BQ5 260 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 FNBP1Q96RU3 617 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 MMS19Q96T76 1030 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 CGRRF1Q99675 332 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 EPC1Q9H2F5 836 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 SLC39A2Q9NP94 309 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 GKN1Q9NS71 199 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 UXTQ9UBK9 157 aaPredicted RBP13.87□□□□□ -0.19
FN1-226ENST00000496542 GREB1Q4ZG55 1949 aa13.87□□□□□ -0.19
FN1-226ENST00000496542 PDGFRBP09619 1106 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 PDIA4P13667 645 aaKnown RBP13.86□□□□□ -0.19
FN1-226ENST00000496542 LMO2P25791 158 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 DNM1Q05193 864 aaKnown RBP13.86□□□□□ -0.19
FN1-226ENST00000496542 EHHADHQ08426 723 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 CUL4BQ13620 913 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 PSMD6Q15008 389 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 DGKKQ5KSL6 1271 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 TRIM68Q6AZZ1 485 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 MAMSTRQ6ZN01 415 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 C4orf50Q6ZRC1 276 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 LIMS2Q7Z4I7 341 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 MON1AQ86VX9 555 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 XXYLT1Q8NBI6 393 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 SECISBP2LQ93073 1101 aaKnown RBP13.86□□□□□ -0.19
FN1-226ENST00000496542 RMDN1Q96DB5 314 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 TRMT2BQ96GJ1 504 aaKnown RBP13.86□□□□□ -0.19
FN1-226ENST00000496542 FUBP3Q96I24 572 aaKnown RBP eCLIP13.86□□□□□ -0.19
FN1-226ENST00000496542 EBF3Q9H4W6 596 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 KIF9Q9HAQ2 790 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 CRTAC1Q9NQ79 661 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 TDP1Q9NUW8 608 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 CDH9Q9ULB4 789 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 SPAG17Q6Q759 2223 aa13.86□□□□□ -0.19
FN1-226ENST00000496542 ARSAP15289 507 aa13.85□□□□□ -0.19
FN1-226ENST00000496542 WARSP23381 471 aaKnown RBP13.85□□□□□ -0.19
FN1-226ENST00000496542 BDNFP23560 247 aa13.85□□□□□ -0.19
FN1-226ENST00000496542 MAGEA11P43364 429 aa13.85□□□□□ -0.19
FN1-226ENST00000496542 CYP27A1Q02318 531 aa13.85□□□□□ -0.19
FN1-226ENST00000496542 LPAL2Q16609 132 aa13.85□□□□□ -0.19
FN1-226ENST00000496542 ATL3Q6DD88 541 aa13.85□□□□□ -0.19
FN1-226ENST00000496542 CC2D1AQ6P1N0 951 aaPredicted RBP13.85□□□□□ -0.19
FN1-226ENST00000496542 FAM171BQ6P995 826 aa13.85□□□□□ -0.19
FN1-226ENST00000496542 DPH6Q7L8W6 267 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms