RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 ZNF252P-AS1Q0IIN9 211 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 DMP1Q13316 513 aaPredicted RBP7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 TRIM29Q14134 588 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 TTC38Q5R3I4 469 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 RNF43Q68DV7 783 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 CENPPQ6IPU0 288 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 UNQ6494/PRO21346Q6UXR6 183 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 DSTYKQ6XUX3 929 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 CACNA2D4Q7Z3S7 1137 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 DNAJB7Q7Z6W7 309 aaPredicted RBP7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 BPIFB1Q8TDL5 484 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 GIPC2Q8TF65 315 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 DDX1Q92499 740 aaKnown RBP7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 E2F7Q96AV8 911 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 GPR88Q9GZN0 384 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 HPS4Q9NQG7 708 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 ZMIZ1Q9ULJ6 1067 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 CCL26Q9Y258 94 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 ZFYVE26Q68DK2 2539 aa7.53□□□□□ -1.2
CHCHD3-206ENST00000496427 PLXNB3Q9ULL4 1909 aa7.52□□□□□ -1.2
CHCHD3-206ENST00000496427 ATRXP46100 2492 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 PTPRBP23467 1997 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 ANTXRLA6NF34 631 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 EPB41L2O43491 1005 aaKnown RBP7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 ARSAP15289 507 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 CDC25AP30304 524 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 NMT1P30419 496 aaKnown RBP7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 LRPAP1P30533 357 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 AARSP49588 968 aaKnown RBP eCLIP7.52□□□□□ -1.214e-6■■■■■ 30.7
CHCHD3-206ENST00000496427 MCM2P49736 904 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 NOVA1P51513 510 aaKnown RBP7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 MLLT6P55198 1093 aaPredicted RBP7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 GPR17Q13304 367 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 TUSC1Q2TAM9 212 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 ITPRIPL2Q3MIP1 535 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 PLK5Q496M5 336 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 ARHGAP15Q53QZ3 475 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 OVOS1Q6IE37 1185 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 RINT1Q6NUQ1 792 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 C1orf228Q6PIY5 440 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 HAUS6Q7Z4H7 955 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 USP37Q86T82 979 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 OR10T2Q8NGX3 314 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 PSMG2Q969U7 264 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 SEPT5Q99719 369 aaPredicted RBP7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 LSM14BQ9BX40 385 aaKnown RBP7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 ZMYND15Q9H091 742 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 DUSP15Q9H1R2 295 aaPredicted RBP7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 EBF3Q9H4W6 596 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 FBRSL1Q9HCM7 1045 aaKnown RBP7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 SH2B1Q9NRF2 756 aaPredicted RBP7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 GKN1Q9NS71 199 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 LRWD1Q9UFC0 647 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 SLC8A2Q9UPR5 921 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 INVSQ9Y283 1065 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 GON4LQ3T8J9 2241 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 PCNX2A6NKB5 2137 aa7.52□□□□□ -1.21
CHCHD3-206ENST00000496427 PCDH15Q96QU1 1955 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 NPHP3-ACAD11A0A0J9YXS1 232 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 TTC26A0AVF1 554 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 OR6C75A6NL08 312 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 FIGNL2A6NMB9 653 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 C4orf47A7E2U8 309 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 LACTBL1A8MY62 500 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 PATE3B3GLJ2 98 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 FOXD2O60548 495 aaPredicted RBP7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 TOM1L1O75674 476 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 OAZ2O95190 189 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 MUTP22033 750 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 HOXA6P31267 233 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 GPR15P49685 360 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 CREB5Q02930 508 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 DHX9Q08211 1270 aaKnown RBP7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 STRN3Q13033 797 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 ANKRD1Q15327 319 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 ZRSR1Q15695 479 aaKnown RBP7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 MGAT5BQ3V5L5 792 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 SLC39A12Q504Y0 691 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 TMEM196Q5HYL7 178 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 RNFT1Q5M7Z0 435 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 KIAA1211LQ6NV74 962 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 C1orf186Q6ZWK4 172 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 CCDC83Q8IWF9 413 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 C4orf32Q8N8J7 132 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 MAB21L3Q8N8X9 362 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 TTC16Q8NEE8 873 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 RPLP0P6Q8NHW5 317 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 EZH1Q92800 747 aaPredicted RBP7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 BICD1Q96G01 975 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 LOXL4Q96JB6 756 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 SENP8Q96LD8 212 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 PLIN2Q99541 437 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 SLC46A2Q9BY10 475 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 TPSD1Q9BZJ3 242 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 TASP1Q9H6P5 420 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 VPS45Q9NRW7 570 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 OBP2AQ9NY56 170 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 MAFFQ9ULX9 164 aa7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 UBQLN1Q9UMX0 589 aaKnown RBP7.51□□□□□ -1.21
CHCHD3-206ENST00000496427 TMEM131Q92545 1883 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms