RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 TMEM150AQ86TG1 271 aa12.66□□□□□ -0.38
THBS3-208ENST00000496332 SCN4BQ8IWT1 228 aa12.66□□□□□ -0.38
THBS3-208ENST00000496332 FMR1NBQ8N0W7 255 aaPredicted RBP12.66□□□□□ -0.38
THBS3-208ENST00000496332 OR6B3Q8NGW1 331 aa12.66□□□□□ -0.38
THBS3-208ENST00000496332 MYLPFQ96A32 169 aa12.66□□□□□ -0.38
THBS3-208ENST00000496332 SYAP1Q96A49 352 aaPredicted RBP12.66□□□□□ -0.38
THBS3-208ENST00000496332 CCDC34Q96HJ3 373 aa12.66□□□□□ -0.38
THBS3-208ENST00000496332 FUBP3Q96I24 572 aaKnown RBP eCLIP12.66□□□□□ -0.38
THBS3-208ENST00000496332 SLC46A2Q9BY10 475 aa12.66□□□□□ -0.38
THBS3-208ENST00000496332 XYLT2Q9H1B5 865 aa12.66□□□□□ -0.38
THBS3-208ENST00000496332 LTB4R2Q9NPC1 389 aa12.66□□□□□ -0.38
THBS3-208ENST00000496332 CRTAC1Q9NQ79 661 aa12.66□□□□□ -0.38
THBS3-208ENST00000496332 MAGEC2Q9UBF1 373 aaPredicted RBP12.66□□□□□ -0.38
THBS3-208ENST00000496332 NXF1Q9UBU9 619 aaKnown RBP12.66□□□□□ -0.38
THBS3-208ENST00000496332 FRMD4BQ9Y2L6 1034 aa12.66□□□□□ -0.38
THBS3-208ENST00000496332 COL4A3Q01955 1670 aa12.66□□□□□ -0.38
THBS3-208ENST00000496332 USP34Q70CQ2 3546 aa12.65□□□□□ -0.38
THBS3-208ENST00000496332 SLC38A8A6NNN8 435 aa12.65□□□□□ -0.38
THBS3-208ENST00000496332 DPYSL4O14531 572 aa12.65□□□□□ -0.38
THBS3-208ENST00000496332 NOL4O94818 638 aa12.65□□□□□ -0.38
THBS3-208ENST00000496332 CLSTN1O94985 981 aa12.65□□□□□ -0.38
THBS3-208ENST00000496332 WEE1P30291 646 aa12.65□□□□□ -0.38
THBS3-208ENST00000496332 MAGEA11P43364 429 aa12.65□□□□□ -0.38
THBS3-208ENST00000496332 CYP27A1Q02318 531 aa12.65□□□□□ -0.38
THBS3-208ENST00000496332 FCHO2Q0JRZ9 810 aa12.65□□□□□ -0.38
THBS3-208ENST00000496332 PNOCQ13519 176 aa12.65□□□□□ -0.38
THBS3-208ENST00000496332 NCOA4Q13772 614 aa12.65□□□□□ -0.38
THBS3-208ENST00000496332 MAPRE1Q15691 268 aaKnown RBP12.65□□□□□ -0.38
THBS3-208ENST00000496332 ZNF852Q6ZMS4 543 aa12.65□□□□□ -0.38
THBS3-208ENST00000496332 GUF1Q8N442 669 aaKnown RBP12.65□□□□□ -0.38
THBS3-208ENST00000496332 MYCBPAPQ8TBZ2 947 aa12.65□□□□□ -0.38
THBS3-208ENST00000496332 LRRC3BQ96PB8 259 aa12.65□□□□□ -0.38
THBS3-208ENST00000496332 OSBPL6Q9BZF3 934 aa12.65□□□□□ -0.38
THBS3-208ENST00000496332 SMG9Q9H0W8 520 aaKnown RBP12.65□□□□□ -0.38
THBS3-208ENST00000496332 TRPV5Q9NQA5 729 aa12.65□□□□□ -0.38
THBS3-208ENST00000496332 NME7Q9Y5B8 376 aa12.65□□□□□ -0.38
THBS3-208ENST00000496332 SHISA7A6NL88 538 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 A8MXQ7 604 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 ARNTLO00327 626 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 MAN2B1O00754 1011 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 CHADO15335 359 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 VNN1O95497 513 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 PRAMEF12O95522 483 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 PTPN1P18031 435 aaKnown RBP12.64□□□□□ -0.39
THBS3-208ENST00000496332 BDNFP23560 247 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 NR2F2P24468 414 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 TARSP26639 723 aaKnown RBP12.64□□□□□ -0.39
THBS3-208ENST00000496332 NFIL3Q16649 462 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 ZNF699Q32M78 642 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 MDH1BQ5I0G3 518 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 TXNDC8Q6A555 127 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 VSTM1Q6UX27 236 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 MAB21L3Q8N8X9 362 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 ENGASEQ8NFI3 743 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 TMC2Q8TDI7 906 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 CSGALNACT1Q8TDX6 532 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 MRPS31Q92665 395 aaKnown RBP12.64□□□□□ -0.39
THBS3-208ENST00000496332 ELMO3Q96BJ8 720 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 TRMT2BQ96GJ1 504 aaKnown RBP12.64□□□□□ -0.39
THBS3-208ENST00000496332 PCED1BQ96HM7 432 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 MYRFLQ96LU7 910 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 NELL2Q99435 816 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 BCO2Q9BYV7 579 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 DPEP3Q9H4B8 488 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 VRTNQ9H8Y1 702 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 OBP2AQ9NY56 170 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 UXTQ9UBK9 157 aaPredicted RBP12.64□□□□□ -0.39
THBS3-208ENST00000496332 ZMYM5Q9UJ78 669 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 MRPS17Q9Y2R5 130 aaKnown RBP12.64□□□□□ -0.39
THBS3-208ENST00000496332 PIAS3Q9Y6X2 628 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 PIEZO1Q92508 2521 aa12.64□□□□□ -0.39
THBS3-208ENST00000496332 IKBKBO14920 756 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 MAPK13O15264 365 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 AKAP3O75969 853 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 DDX6P26196 483 aaKnown RBP eCLIP12.63□□□□□ -0.39
THBS3-208ENST00000496332 RPL13P26373 211 aaKnown RBP12.63□□□□□ -0.39
THBS3-208ENST00000496332 AVPR1AP37288 418 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 GRIK1P39086 918 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 VAMP7P51809 220 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 CDH8P55286 799 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 FAM160A1Q05DH4 1040 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 ADAM9Q13443 819 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 SGSM1Q2NKQ1 1148 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 ZACNQ401N2 412 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 ARHGAP29Q52LW3 1261 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 ZNF667Q5HYK9 610 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 C1orf220Q5T0J3 134 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 SV2AQ7L0J3 742 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 FRMD5Q7Z6J6 570 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 MON1AQ86VX9 555 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 C1orf210Q8IVY1 113 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 SMYD4Q8IYR2 804 aaPredicted RBP12.63□□□□□ -0.39
THBS3-208ENST00000496332 CMTM8Q8IZV2 173 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 CELF5Q8N6W0 485 aaKnown RBP12.63□□□□□ -0.39
THBS3-208ENST00000496332 BPIFB1Q8TDL5 484 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 ZFYVE19Q96K21 471 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 SPATA17Q96L03 361 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 SMYD3Q9H7B4 428 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 RMND1Q9NWS8 449 aa12.63□□□□□ -0.39
THBS3-208ENST00000496332 CACNA1HO95180 2353 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms