RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 SRSF5Q13243 272 aaKnown RBP11.71□□□□□ -0.53
RNF220-217ENST00000496262 PUM1Q14671 1186 aaKnown RBP eCLIP11.71□□□□□ -0.53
RNF220-217ENST00000496262 TXNDC8Q6A555 127 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 TRIM68Q6AZZ1 485 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.71□□□□□ -0.53
RNF220-217ENST00000496262 RALGPS2Q86X27 583 aaPredicted RBP11.71□□□□□ -0.53
RNF220-217ENST00000496262 BRSK2Q8IWQ3 736 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 CMTM8Q8IZV2 173 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 PDCL2Q8N4E4 241 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 C1orf127Q8N9H9 656 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 SPC24Q8NBT2 197 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 MSANTD3Q96H12 275 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 ARID3AQ99856 593 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 IER2Q9BTL4 223 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 MTMR12Q9C0I1 747 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 TNMDQ9H2S6 317 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 PDE11AQ9HCR9 933 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 TRPC7Q9HCX4 862 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 C2orf42Q9NWW7 574 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 THG1LQ9NWX6 298 aaKnown RBP11.71□□□□□ -0.53
RNF220-217ENST00000496262 DDX43Q9NXZ2 648 aaKnown RBP11.71□□□□□ -0.53
RNF220-217ENST00000496262 L1RE1Q9UN81 338 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 CCL26Q9Y258 94 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 PCDHB13Q9Y5F0 798 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 SNX9Q9Y5X1 595 aa11.71□□□□□ -0.53
RNF220-217ENST00000496262 DNAH14Q0VDD8 3507 aa11.71□□□□□ -0.54
RNF220-217ENST00000496262 OTOGLQ3ZCN5 2332 aa11.71□□□□□ -0.54
RNF220-217ENST00000496262 ANK1P16157 1881 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 TMEM191BP0C7N4 346 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 CYP2F1P24903 491 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 NLRP12P59046 1061 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 SPEM2Q0P670 501 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 SMARCB1Q12824 385 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 SIM2Q14190 667 aaPredicted RBP11.7□□□□□ -0.54
RNF220-217ENST00000496262 STK38Q15208 465 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 DDR2Q16832 855 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 ITPRIPL2Q3MIP1 535 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 C1orf228Q6PIY5 440 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 TMEM150AQ86TG1 271 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 NT5DC4Q86YG4 428 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 SPEM1Q8N4L4 309 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 CELF5Q8N6W0 485 aaKnown RBP11.7□□□□□ -0.54
RNF220-217ENST00000496262 GLIS3Q8NEA6 775 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 CACTINQ8WUQ7 758 aaKnown RBP11.7□□□□□ -0.54
RNF220-217ENST00000496262 HPS3Q969F9 1004 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 EBF3Q9H4W6 596 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 OLFML3Q9NRN5 406 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 OBP2AQ9NY56 170 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 SCN1AP35498 2009 aa11.7□□□□□ -0.54
RNF220-217ENST00000496262 EXTL3O43909 919 aa11.69□□□□□ -0.54
RNF220-217ENST00000496262 LDHAP00338 332 aaKnown RBP11.69□□□□□ -0.54
RNF220-217ENST00000496262 HMGA1P17096 107 aaKnown RBP11.69□□□□□ -0.54
RNF220-217ENST00000496262 GARTP22102 1010 aa11.69□□□□□ -0.54
RNF220-217ENST00000496262 MLLT6P55198 1093 aaPredicted RBP11.69□□□□□ -0.54
RNF220-217ENST00000496262 MYL7Q01449 175 aa11.69□□□□□ -0.54
RNF220-217ENST00000496262 POU5F1Q01860 360 aaKnown RBP11.69□□□□□ -0.54
RNF220-217ENST00000496262 SLC39A14Q15043 492 aa11.69□□□□□ -0.54
RNF220-217ENST00000496262 NFE2Q16621 373 aaPredicted RBP11.69□□□□□ -0.54
RNF220-217ENST00000496262 INTS6LQ5JSJ4 861 aaKnown RBP11.69□□□□□ -0.54
RNF220-217ENST00000496262 DGKKQ5KSL6 1271 aa11.69□□□□□ -0.54
RNF220-217ENST00000496262 CC2D1AQ6P1N0 951 aaPredicted RBP11.69□□□□□ -0.54
RNF220-217ENST00000496262 OSTM1Q86WC4 334 aa11.69□□□□□ -0.54
RNF220-217ENST00000496262 SPATA2LQ8IUW3 424 aaPredicted RBP11.69□□□□□ -0.54
RNF220-217ENST00000496262 SCN4BQ8IWT1 228 aa11.69□□□□□ -0.54
RNF220-217ENST00000496262 ADGRF2Q8IZF7 708 aa11.69□□□□□ -0.54
RNF220-217ENST00000496262 GPD1LQ8N335 351 aa11.69□□□□□ -0.54
RNF220-217ENST00000496262 MRPS31Q92665 395 aaKnown RBP11.69□□□□□ -0.54
RNF220-217ENST00000496262 USP13Q92995 863 aaPredicted RBP11.69□□□□□ -0.54
RNF220-217ENST00000496262 SPATA32Q96LK8 384 aa11.69□□□□□ -0.54
RNF220-217ENST00000496262 CBX8Q9HC52 389 aa11.69□□□□□ -0.54
RNF220-217ENST00000496262 PARD6AQ9NPB6 346 aa11.69□□□□□ -0.54
RNF220-217ENST00000496262 GKN1Q9NS71 199 aa11.69□□□□□ -0.54
RNF220-217ENST00000496262 DLL3Q9NYJ7 618 aa11.69□□□□□ -0.54
RNF220-217ENST00000496262 GTF3C4Q9UKN8 822 aa11.69□□□□□ -0.54
RNF220-217ENST00000496262 ITGA11Q9UKX5 1188 aa11.69□□□□□ -0.54
RNF220-217ENST00000496262 CDV3Q9UKY7 258 aaKnown RBP11.69□□□□□ -0.54
RNF220-217ENST00000496262 PTPRJQ12913 1337 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.68□□□□□ -0.54
RNF220-217ENST00000496262 FRMD3A2A2Y4 597 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 K7ESF4 209 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 RIOK3O14730 519 aaKnown RBP11.68□□□□□ -0.54
RNF220-217ENST00000496262 HRO43593 1189 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 ABCB7O75027 752 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 CSH1P0DML2 217 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 CSH2P0DML3 217 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 ARSAP15289 507 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 CDC25BP30305 580 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 PXNP49023 591 aaPredicted RBP11.68□□□□□ -0.54
RNF220-217ENST00000496262 ZNF75DP51815 510 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 PSMC1P62191 440 aaKnown RBP11.68□□□□□ -0.54
RNF220-217ENST00000496262 RBP5P82980 135 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 LMNB2Q03252 620 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 ALCAMQ13740 583 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 RUNX3Q13761 415 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 CCINQ13939 588 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 ANO6Q4KMQ2 910 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 LAIR1Q6GTX8 287 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 MAMSTRQ6ZN01 415 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 RBM43Q6ZSC3 357 aaKnown RBP11.68□□□□□ -0.54
RNF220-217ENST00000496262 CEP68Q76N32 757 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms