RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 ZSCAN18Q8TBC5 510 aaPredicted RBP11.23□□□□□ -0.61
ERGIC3-219ENST00000496172 DDX1Q92499 740 aaKnown RBP11.23□□□□□ -0.61
ERGIC3-219ENST00000496172 SMARCD2Q92925 531 aa11.23□□□□□ -0.61
ERGIC3-219ENST00000496172 CLDN23Q96B33 292 aa11.23□□□□□ -0.61
ERGIC3-219ENST00000496172 FAM84AQ96KN4 292 aa11.23□□□□□ -0.61
ERGIC3-219ENST00000496172 ASB16Q96NS5 453 aa11.23□□□□□ -0.61
ERGIC3-219ENST00000496172 MMS19Q96T76 1030 aa11.23□□□□□ -0.61
ERGIC3-219ENST00000496172 LPIN3Q9BQK8 851 aa11.23□□□□□ -0.61
ERGIC3-219ENST00000496172 PI4K2AQ9BTU6 479 aa11.23□□□□□ -0.61
ERGIC3-219ENST00000496172 DNAJC25Q9H1X3 360 aa11.23□□□□□ -0.61
ERGIC3-219ENST00000496172 ATXN3LQ9H3M9 355 aa11.23□□□□□ -0.61
ERGIC3-219ENST00000496172 ABCB6Q9NP58 842 aa11.23□□□□□ -0.61
ERGIC3-219ENST00000496172 FRMD4BQ9Y2L6 1034 aa11.23□□□□□ -0.61
ERGIC3-219ENST00000496172 PTPRJQ12913 1337 aa11.23□□□□□ -0.61
ERGIC3-219ENST00000496172 COL4A3Q01955 1670 aa11.23□□□□□ -0.61
ERGIC3-219ENST00000496172 TCHHQ07283 1943 aa11.23□□□□□ -0.61
ERGIC3-219ENST00000496172 DOCK6Q96HP0 2047 aa11.23□□□□□ -0.61
ERGIC3-219ENST00000496172 PDXKO00764 312 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 GABRDO14764 452 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 FOXD2O60548 495 aaPredicted RBP11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 MOSPD3O75425 235 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 RHOBTB3O94955 611 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 NR3C1P04150 777 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 FAM163BP0C2L3 166 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 ACAT1P24752 427 aaKnown RBP11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 GABRR2P28476 465 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 CDC25CP30307 473 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 ATICP31939 592 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 CDR1P51861 262 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 CSTF1Q05048 431 aaKnown RBP11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 DPYDQ12882 1025 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 BIRC3Q13489 604 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 SNW1Q13573 536 aaKnown RBP11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 MAPRE1Q15691 268 aaKnown RBP11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 MLF2Q15773 248 aaPredicted RBP11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 SOWAHAQ2M3V2 549 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 SLC44A4Q53GD3 710 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 LAIR1Q6GTX8 287 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 C4orf50Q6ZRC1 276 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 TMC8Q8IU68 726 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 YAF2Q8IY57 180 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 SHKBP1Q8TBC3 707 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 GIPC2Q8TF65 315 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 TMEM174Q8WUU8 243 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 SYAP1Q96A49 352 aaPredicted RBP11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 ZSWIM3Q96MP5 696 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 NOTCH4Q99466 2003 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 TRMT61BQ9BVS5 477 aaKnown RBP11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 LRRC3Q9BY71 257 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 PLA2G2FQ9BZM2 168 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 SNX25Q9H3E2 840 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 KCTD10Q9H3F6 313 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 GOLPH3LQ9H4A5 285 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 TRPV4Q9HBA0 871 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 LTB4R2Q9NPC1 389 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 DMAC2Q9NW81 257 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 HOOK1Q9UJC3 728 aaKnown RBP11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 GTF3C4Q9UKN8 822 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 CDH9Q9ULB4 789 aa11.22□□□□□ -0.61
ERGIC3-219ENST00000496172 RALGAPA1Q6GYQ0 2036 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 TSC2P49815 1807 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 DPYSL4O14531 572 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 CST3P01034 146 aaPredicted RBP11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 PRR29P0C7W0 189 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 CSH1P0DML2 217 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 CSH2P0DML3 217 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 TDGF1P13385 188 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 PSMC3P17980 439 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 ATF6P18850 670 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 WARSP23381 471 aaKnown RBP11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 FCARP24071 287 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 RPL13P26373 211 aaKnown RBP11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 GNL1P36915 607 aaPredicted RBP11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 KCNB1Q14721 858 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 WDR72Q3MJ13 1102 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 GPR158Q5T848 1215 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 CEP135Q66GS9 1140 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 SCARA3Q6AZY7 606 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 MAMSTRQ6ZN01 415 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 DEPDC1BQ8WUY9 529 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 DNASE1L2Q92874 299 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 IRF7Q92985 503 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 FUBP3Q96I24 572 aaKnown RBP eCLIP11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 BRD9Q9H8M2 597 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 TMLHEQ9NVH6 421 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 RMND1Q9NWS8 449 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 MAGEC2Q9UBF1 373 aaPredicted RBP11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 UXTQ9UBK9 157 aaPredicted RBP11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 ZMYM5Q9UJ78 669 aa11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 RALYQ9UKM9 306 aaKnown RBP11.21□□□□□ -0.61
ERGIC3-219ENST00000496172 IGF2RP11717 2491 aa11.2□□□□□ -0.62
ERGIC3-219ENST00000496172 ZNF263O14978 683 aa11.2□□□□□ -0.62
ERGIC3-219ENST00000496172 SMC2O95347 1197 aa11.2□□□□□ -0.62
ERGIC3-219ENST00000496172 STAU1O95793 577 aaKnown RBP11.2□□□□□ -0.62
ERGIC3-219ENST00000496172 RETP07949 1114 aa11.2□□□□□ -0.62
ERGIC3-219ENST00000496172 PDGFRBP09619 1106 aa11.2□□□□□ -0.62
ERGIC3-219ENST00000496172 CYP2F1P24903 491 aa11.2□□□□□ -0.62
ERGIC3-219ENST00000496172 DDX6P26196 483 aaKnown RBP eCLIP11.2□□□□□ -0.62
ERGIC3-219ENST00000496172 GDI1P31150 447 aa11.2□□□□□ -0.62
ERGIC3-219ENST00000496172 VIPR2P41587 438 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms