RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 PMF1Q6P1K2 205 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 TRIM72Q6ZMU5 477 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 TTC30AQ86WT1 665 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 ART4Q93070 314 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 CAPS2Q9BXY5 557 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 MRPL47Q9HD33 250 aaKnown RBP10.97□□□□□ -0.65
SAMM50-206ENST00000494795 GPATCH2LQ9NWQ4 482 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 PSD3Q9NYI0 1048 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 TSPAN16Q9UKR8 245 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 MTUS1Q9ULD2 1270 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 PCDHGC3Q9UN70 934 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.97□□□□□ -0.65
SAMM50-206ENST00000494795 PIN4Q9Y237 131 aaKnown RBP10.97□□□□□ -0.65
SAMM50-206ENST00000494795 IL18RAPO95256 599 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 NR1D1P20393 614 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 EIF4BP23588 611 aaKnown RBP10.97□□□□□ -0.65
SAMM50-206ENST00000494795 CDH5P33151 784 aaPredicted RBP10.97□□□□□ -0.65
SAMM50-206ENST00000494795 MAGOHP61326 146 aaKnown RBP10.97□□□□□ -0.65
SAMM50-206ENST00000494795 CRHR2Q13324 411 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 KRT71Q3SY84 523 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 SCUBE3Q8IX30 993 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.97□□□□□ -0.65
SAMM50-206ENST00000494795 FAM81BQ96LP2 452 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 GABRQQ9UN88 632 aa10.97□□□□□ -0.65
SAMM50-206ENST00000494795 CTSHP09668 335 aa10.96□□□□□ -0.65
SAMM50-206ENST00000494795 SLC1A1P43005 524 aa10.96□□□□□ -0.65
SAMM50-206ENST00000494795 ADAM17P78536 824 aa10.96□□□□□ -0.65
SAMM50-206ENST00000494795 ATP11AP98196 1134 aa10.96□□□□□ -0.65
SAMM50-206ENST00000494795 SLC25A11Q02978 314 aaKnown RBP10.96□□□□□ -0.65
SAMM50-206ENST00000494795 FASTKD3Q14CZ7 662 aaKnown RBP10.96□□□□□ -0.65
SAMM50-206ENST00000494795 LONRF1Q17RB8 773 aa10.96□□□□□ -0.65
SAMM50-206ENST00000494795 NPNTQ6UXI9 565 aa10.96□□□□□ -0.65
SAMM50-206ENST00000494795 CTU1Q7Z7A3 348 aaKnown RBP10.96□□□□□ -0.65
SAMM50-206ENST00000494795 SAPCD2Q86UD0 394 aa10.96□□□□□ -0.65
SAMM50-206ENST00000494795 EXOC8Q8IYI6 725 aa10.96□□□□□ -0.65
SAMM50-206ENST00000494795 KATNAL2Q8IYT4 538 aa10.96□□□□□ -0.65
SAMM50-206ENST00000494795 C12orf50Q8NA57 414 aaPredicted RBP10.96□□□□□ -0.65
SAMM50-206ENST00000494795 C3orf20Q8ND61 904 aa10.96□□□□□ -0.65
SAMM50-206ENST00000494795 VCPIP1Q96JH7 1222 aa10.96□□□□□ -0.65
SAMM50-206ENST00000494795 CFAP57Q96MR6 1250 aa10.96□□□□□ -0.65
SAMM50-206ENST00000494795 FAM107BQ9H098 131 aa10.96□□□□□ -0.65
SAMM50-206ENST00000494795 SYNCQ9H7C4 482 aa10.96□□□□□ -0.65
SAMM50-206ENST00000494795 SLC15A5A6NIM6 579 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 ATP2C2O75185 946 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 CCDC130P13994 396 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 ADCY1Q08828 1119 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 SNX17Q15036 470 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 KYNUQ16719 465 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 CXCL17Q6UXB2 119 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 CAPN12Q6ZSI9 719 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 FAM183BPQ6ZVS7 135 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 CD302Q8IX05 232 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 C7orf31Q8N865 590 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 HSPH1Q92598 858 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 TRIM11Q96F44 468 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 IP6K2Q9UHH9 426 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 SCINQ9Y6U3 715 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 GOLGA8MH3BSY2 632 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 MYZAPP0CAP1 466 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 DARSP14868 501 aaKnown RBP10.96□□□□□ -0.66
SAMM50-206ENST00000494795 ADCY8P40145 1251 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 SURF1Q15526 300 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 SOWAHAQ2M3V2 549 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 UBXN11Q5T124 520 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 C17orf99Q6UX52 265 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 SPOCD1Q6ZMY3 1216 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 LRRC45Q96CN5 670 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 C9orf72Q96LT7 481 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 MIS12Q9H081 205 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 CDC42EP4Q9H3Q1 356 aaKnown RBP10.96□□□□□ -0.66
SAMM50-206ENST00000494795 ASB7Q9H672 318 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 NR2E3Q9Y5X4 410 aa10.96□□□□□ -0.66
SAMM50-206ENST00000494795 PSTPIP1O43586 416 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 SHOX2O60902 331 aaPredicted RBP10.95□□□□□ -0.66
SAMM50-206ENST00000494795 CALB1P05937 261 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 PECAM1P16284 738 aaPredicted RBP10.95□□□□□ -0.66
SAMM50-206ENST00000494795 CDKN2BP42772 138 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 POU5F1BQ06416 359 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 FAM102AQ5T9C2 384 aaPredicted RBP10.95□□□□□ -0.66
SAMM50-206ENST00000494795 RHBDF2Q6PJF5 856 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 CYP4V2Q6ZWL3 525 aaPredicted RBP10.95□□□□□ -0.66
SAMM50-206ENST00000494795 LPPQ93052 612 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 SNX27Q96L92 541 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 ADAM7Q9H2U9 754 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 PABPC3Q9H361 631 aaKnown RBP10.95□□□□□ -0.66
SAMM50-206ENST00000494795 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.95□□□□□ -0.66
SAMM50-206ENST00000494795 PARP2Q9UGN5 583 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 RSPH14Q9UHP6 348 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 CDH23Q9H251 3354 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 MBLAC1A4D2B0 266 aaPredicted RBP10.95□□□□□ -0.66
SAMM50-206ENST00000494795 RIPK2O43353 540 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 LSM8O95777 96 aaKnown RBP10.95□□□□□ -0.66
SAMM50-206ENST00000494795 C6orf222P0C671 652 aaPredicted RBP10.95□□□□□ -0.66
SAMM50-206ENST00000494795 MIPP30301 263 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 GRM5P41594 1212 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 FNTAP49354 379 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 PSEN2P49810 448 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 GOLGA7BQ2TAP0 167 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 EXD1Q8NHP7 514 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 GTF3C2Q8WUA4 911 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms