RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 UBTFL6P0CB48 400 aaPredicted RBP16.12■□□□□ 0.17
SDF4-207ENST00000494748 BRD2P25440 801 aaKnown RBP16.12■□□□□ 0.17
SDF4-207ENST00000494748 LIN9Q5TKA1 542 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 TDRD10Q5VZ19 366 aaKnown RBP16.12■□□□□ 0.17
SDF4-207ENST00000494748 LMBRD2Q68DH5 695 aaPredicted RBP16.12■□□□□ 0.17
SDF4-207ENST00000494748 C3orf62Q6ZUJ4 267 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 IGDCC3Q8IVU1 814 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 DRAXINQ8NBI3 349 aaPredicted RBP16.12■□□□□ 0.17
SDF4-207ENST00000494748 MCUR1Q96AQ8 359 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 PDP2Q9P2J9 529 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 CNTN6Q9UQ52 1028 aa16.12■□□□□ 0.17
SDF4-207ENST00000494748 F8VP50 259 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 F8W8V4 182 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 MYL2P10916 166 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 SOX10P56693 466 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 MRPS9P82933 396 aaKnown RBP16.11■□□□□ 0.17
SDF4-207ENST00000494748 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
SDF4-207ENST00000494748 FAM102BQ5T8I3 360 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 SCARA3Q6AZY7 606 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 VPS52Q8N1B4 723 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 ATP11CQ8NB49 1132 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 FBXO36Q8NEA4 188 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 SHKBP1Q8TBC3 707 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 ALKBH8Q96BT7 664 aaKnown RBP16.11■□□□□ 0.17
SDF4-207ENST00000494748 EHMT1Q9H9B1 1298 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 EXOC7Q9UPT5 735 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 ITGBL1O95965 494 aaPredicted RBP16.11■□□□□ 0.17
SDF4-207ENST00000494748 C1QAP02745 245 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 C4BPAP04003 597 aaKnown RBP16.11■□□□□ 0.17
SDF4-207ENST00000494748 ESRRAP11474 423 aaPredicted RBP16.11■□□□□ 0.17
SDF4-207ENST00000494748 ANPEPP15144 967 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 TKFCQ3LXA3 575 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 SESTD1Q86VW0 696 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 C4orf19Q8IY42 314 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 SAE1Q9UBE0 346 aaPredicted RBP16.11■□□□□ 0.17
SDF4-207ENST00000494748 IP6K2Q9UHH9 426 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 MRPL11Q9Y3B7 192 aaKnown RBP16.11■□□□□ 0.17
SDF4-207ENST00000494748 UBIAD1Q9Y5Z9 338 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 EP400Q96L91 3159 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 BUD23O43709 281 aaKnown RBP16.11■□□□□ 0.17
SDF4-207ENST00000494748 PGM1P36871 562 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 SSR1P43307 286 aaKnown RBP16.11■□□□□ 0.17
SDF4-207ENST00000494748 CPA2P48052 419 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 SERPINB4P48594 390 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 CNPY1Q3B7I2 92 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 ZACNQ401N2 412 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 LRRC38Q5VT99 294 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 RFX8Q6ZV50 586 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 GPD1LQ8N335 351 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 PYROXD1Q8WU10 500 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 NTPCRQ9BSD7 190 aaKnown RBP16.11■□□□□ 0.17
SDF4-207ENST00000494748 PPP1R12CQ9BZL4 782 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 ASCC2Q9H1I8 757 aaPredicted RBP16.11■□□□□ 0.17
SDF4-207ENST00000494748 TMX2Q9Y320 296 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 SCINQ9Y6U3 715 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 KIAA1217Q5T5P2 1943 aa16.11■□□□□ 0.17
SDF4-207ENST00000494748 POLRMTO00411 1230 aaKnown RBP16.1■□□□□ 0.17
SDF4-207ENST00000494748 CRABP2P29373 138 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 PSMC5P62195 406 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 TBC1D25Q3MII6 688 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 TFDP3Q5H9I0 405 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 TRIM72Q6ZMU5 477 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 NIPA1Q7RTP0 329 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 RBM15BQ8NDT2 890 aaKnown RBP16.1■□□□□ 0.17
SDF4-207ENST00000494748 APOPT1Q96IL0 206 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 SGK1O00141 431 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 KLF11O14901 512 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 HLA-DRAP01903 254 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 MMP8P22894 467 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 MTM1Q13496 603 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 PDCD2Q16342 344 aaPredicted RBP16.1■□□□□ 0.17
SDF4-207ENST00000494748 KLHL38Q2WGJ6 581 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 CIAPIN1Q6FI81 312 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 CDHR3Q6ZTQ4 885 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 LDHDQ86WU2 507 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 RHPN2Q8IUC4 686 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 PPIL6Q8IXY8 311 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 PDCD7Q8N8D1 485 aaKnown RBP16.1■□□□□ 0.17
SDF4-207ENST00000494748 CLPTM1LQ96KA5 538 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 FAM111AQ96PZ2 611 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 OCEL1Q9H607 264 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 PARVAQ9NVD7 372 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 KAT6AQ92794 2004 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 COL2A1P02458 1487 aaPredicted RBP16.1■□□□□ 0.17
SDF4-207ENST00000494748 LPXNO60711 386 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 GSTT1P30711 240 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 BPIFB4P59827 614 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 LAMB3Q13751 1172 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 RIPOR1Q6ZS17 1223 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 ANO5Q75V66 913 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 NET1Q7Z628 596 aaPredicted RBP16.1■□□□□ 0.17
SDF4-207ENST00000494748 STMN2Q93045 179 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 FAM213AQ9BRX8 229 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 PPME1Q9Y570 386 aa16.1■□□□□ 0.17
SDF4-207ENST00000494748 CCNE2O96020 404 aa16.09■□□□□ 0.17
SDF4-207ENST00000494748 RTP1P59025 263 aa16.09■□□□□ 0.17
SDF4-207ENST00000494748 ECSITQ9BQ95 431 aa16.09■□□□□ 0.17
SDF4-207ENST00000494748 PPM1HQ9ULR3 514 aa16.09■□□□□ 0.17
SDF4-207ENST00000494748 RNASEH1O60930 286 aaKnown RBP16.09■□□□□ 0.17
SDF4-207ENST00000494748 GNA15P30679 374 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms