RNA–Protein interactions for RNA: ENST00000494707.5

RPGR-209, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 5

Gene RPGR, Length 426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-209ENST00000494707 CYB5RLQ6IPT4 315 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 CCSAPQ6IQ19 270 aaPredicted RBP3.22□□□□□ -1.89
RPGR-209ENST00000494707 TAF2Q6P1X5 1199 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 LAYNQ6UX15 382 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 SLC30A10Q6XR72 485 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 COL23A1Q86Y22 540 aaPredicted RBP3.22□□□□□ -1.89
RPGR-209ENST00000494707 Q8NA96 180 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 POC1BQ8TC44 478 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 SSH3Q8TE77 659 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 ANKS1AQ92625 1134 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 FUBP1Q96AE4 644 aaKnown RBP3.22□□□□□ -1.89
RPGR-209ENST00000494707 HEPHQ9BQS7 1158 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 SARGQ9BW04 601 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 DPH1Q9BZG8 443 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 BTBD1Q9H0C5 482 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 BHMT2Q9H2M3 363 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 DDX21Q9NR30 783 aaKnown RBP eCLIP3.22□□□□□ -1.89
RPGR-209ENST00000494707 IL17RBQ9NRM6 502 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 INTS13Q9NVM9 706 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 ASB6Q9NWX5 421 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 KCTD5Q9NXV2 234 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 VSX1Q9NZR4 365 aaPredicted RBP3.22□□□□□ -1.89
RPGR-209ENST00000494707 FOXJ2Q9P0K8 574 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 HESX1Q9UBX0 185 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 AFF4Q9UHB7 1163 aaKnown RBP3.22□□□□□ -1.89
RPGR-209ENST00000494707 OGDHLQ9ULD0 1010 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 DMTF1Q9Y222 760 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.22□□□□□ -1.89
RPGR-209ENST00000494707 RAD54BQ9Y620 910 aa3.22□□□□□ -1.89
RPGR-209ENST00000494707 SPATA31A3Q5VYP0 1347 aa3.21□□□□□ -1.89
RPGR-209ENST00000494707 A0A087WWL8 130 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 A0A0B4J269 797 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 LRRC3CA6NJW4 275 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 BTN3A1O00481 513 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 TRIAP1O43715 76 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 TBC1D4O60343 1298 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 MAP4K4O95819 1239 aaPredicted RBP3.21□□□□□ -1.9
RPGR-209ENST00000494707 MYL1P05976 194 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 XRCC6P12956 609 aaKnown RBP eCLIP3.21□□□□□ -1.9
RPGR-209ENST00000494707 MYF5P13349 255 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 TRIM27P14373 513 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 RPL17P18621 184 aaKnown RBP3.21□□□□□ -1.9
RPGR-209ENST00000494707 SLC11A2P49281 568 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 CACNA2D1P54289 1103 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 UCP3P55916 312 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 WNT3P56703 355 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 TUBB3Q13509 450 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 IQCB1Q15051 598 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 SAFBQ15424 915 aaKnown RBP eCLIP3.21□□□□□ -1.9
RPGR-209ENST00000494707 TMPRSS9Q7Z410 1059 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 FAM9AQ8IZU1 332 aaPredicted RBP3.21□□□□□ -1.9
RPGR-209ENST00000494707 SLC15A4Q8N697 577 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 DNAJC5GQ8N7S2 189 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 APIPQ96GX9 242 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 LRIG1Q96JA1 1093 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 SLC46A1Q96NT5 459 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 ZNF518BQ9C0D4 1074 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 TTYH3Q9C0H2 523 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 NUP62CLQ9H1M0 184 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 SMOC2Q9H3U7 446 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 ZNF287Q9HBT7 754 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 SEMA4GQ9NTN9 838 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 MRPS18AQ9NVS2 196 aaKnown RBP3.21□□□□□ -1.9
RPGR-209ENST00000494707 SHOC2Q9UQ13 582 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 PCDHGB6Q9Y5F9 930 aa3.21□□□□□ -1.9
RPGR-209ENST00000494707 SETD1BQ9UPS6 1966 aaKnown RBP3.21□□□□□ -1.9
RPGR-209ENST00000494707 MBD3L4A6NDZ8 208 aaPredicted RBP3.2□□□□□ -1.9
RPGR-209ENST00000494707 MBD3L3A6NE82 208 aaPredicted RBP3.2□□□□□ -1.9
RPGR-209ENST00000494707 F5H697 171 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 FOXN3O00409 490 aaPredicted RBP3.2□□□□□ -1.9
RPGR-209ENST00000494707 PEX1O43933 1283 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 PLIN1O60240 522 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 PQBP1O60828 265 aaKnown RBP3.2□□□□□ -1.9
RPGR-209ENST00000494707 RBMXL2O75526 392 aaKnown RBP3.2□□□□□ -1.9
RPGR-209ENST00000494707 C1QL1O75973 258 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 NBPF7P0C2Y1 421 aaPredicted RBP3.2□□□□□ -1.9
RPGR-209ENST00000494707 CYP2C9P11712 490 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 PHKG2P15735 406 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 HOXB6P17509 224 aaKnown RBP3.2□□□□□ -1.9
RPGR-209ENST00000494707 CD6P30203 668 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 PXNP49023 591 aaPredicted RBP3.2□□□□□ -1.9
RPGR-209ENST00000494707 SUMO3P55854 103 aaPredicted RBP3.2□□□□□ -1.9
RPGR-209ENST00000494707 COBLL1Q53SF7 1204 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 RBM20Q5T481 1227 aaKnown RBP3.2□□□□□ -1.9
RPGR-209ENST00000494707 SFRP4Q6FHJ7 346 aaPredicted RBP3.2□□□□□ -1.9
RPGR-209ENST00000494707 TMEM108Q6UXF1 575 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 KSR2Q6VAB6 950 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 NOL8Q76FK4 1167 aaKnown RBP3.2□□□□□ -1.9
RPGR-209ENST00000494707 KRT78Q8N1N4 520 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 MPP5Q8N3R9 675 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 LNX2Q8N448 690 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 B3GALNT2Q8NCR0 500 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 NMD3Q96D46 503 aaKnown RBP3.2□□□□□ -1.9
RPGR-209ENST00000494707 PDLIM2Q96JY6 352 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 OSBPL9Q96SU4 736 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 KRTAP1-5Q9BYS1 174 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 SMURF2Q9HAU4 748 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 A1CFQ9NQ94 594 aaKnown RBP3.2□□□□□ -1.9
RPGR-209ENST00000494707 SLC17A6Q9P2U8 582 aa3.2□□□□□ -1.9
RPGR-209ENST00000494707 RNF7Q9UBF6 113 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms