RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 TKTP29401 623 aaKnown RBP21.81■■□□□ 1.08
KPNA1-210ENST00000494339 FPGSQ05932 587 aa21.81■■□□□ 1.08
KPNA1-210ENST00000494339 PPIGQ13427 754 aaKnown RBP eCLIP21.81■■□□□ 1.088e-7■■□□□ 13
KPNA1-210ENST00000494339 CYP4A22Q5TCH4 519 aa21.81■■□□□ 1.08
KPNA1-210ENST00000494339 ZNF564Q8TBZ8 553 aaPredicted RBP21.81■■□□□ 1.08
KPNA1-210ENST00000494339 ABHD8Q96I13 439 aa21.81■■□□□ 1.08
KPNA1-210ENST00000494339 CPXM1Q96SM3 734 aa21.81■■□□□ 1.08
KPNA1-210ENST00000494339 COLEC11Q9BWP8 271 aa21.81■■□□□ 1.08
KPNA1-210ENST00000494339 COL4A6Q14031 1691 aa21.81■■□□□ 1.08
KPNA1-210ENST00000494339 ZBBXA8MT70 800 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 TRAPPC3O43617 180 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 BAIAP3O94812 1187 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 FTCDO95954 541 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 CALB1P05937 261 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 PCSK1P29120 753 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 PDCLQ13371 301 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 PTPROQ16827 1216 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 PKDCCQ504Y2 493 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 ZNF365Q70YC5 407 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 LRRC57Q8N9N7 239 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 TMEM175Q9BSA9 504 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 SYNCQ9H7C4 482 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 AVENQ9NQS1 362 aaPredicted RBP21.8■■□□□ 1.08
KPNA1-210ENST00000494339 ST7Q9NRC1 585 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 CDH9Q9ULB4 789 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 VWA8A3KMH1 1905 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 MYBPHLA2RUH7 354 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 TULP2O00295 520 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 CLDN5O00501 218 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 BUB1BO60566 1050 aaPredicted RBP21.8■■□□□ 1.08
KPNA1-210ENST00000494339 TYMPP19971 482 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 YWHAHQ04917 246 aaPredicted RBP21.8■■□□□ 1.08
KPNA1-210ENST00000494339 PAPD7Q5XG87 772 aaKnown RBP21.8■■□□□ 1.08
KPNA1-210ENST00000494339 DAAM2Q86T65 1068 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 TMEM173Q86WV6 379 aaPredicted RBP21.8■■□□□ 1.08
KPNA1-210ENST00000494339 FUKQ8N0W3 1084 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 SPATA18Q8TC71 538 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 UVRAGQ9P2Y5 699 aa21.8■■□□□ 1.08
KPNA1-210ENST00000494339 PTPRSQ13332 1948 aa21.79■■□□□ 1.08
KPNA1-210ENST00000494339 AMPD2Q01433 879 aa21.79■■□□□ 1.08
KPNA1-210ENST00000494339 PDE4CQ08493 712 aa21.79■■□□□ 1.08
KPNA1-210ENST00000494339 TCEAL1Q15170 157 aa21.79■■□□□ 1.08
KPNA1-210ENST00000494339 ANKRD52Q8NB46 1076 aa21.79■■□□□ 1.08
KPNA1-210ENST00000494339 MNS1Q8NEH6 495 aa21.79■■□□□ 1.08
KPNA1-210ENST00000494339 BTBD6Q96KE9 485 aa21.79■■□□□ 1.08
KPNA1-210ENST00000494339 GPR62Q9BZJ7 368 aa21.79■■□□□ 1.08
KPNA1-210ENST00000494339 CWH43Q9H720 699 aa21.79■■□□□ 1.08
KPNA1-210ENST00000494339 PIK3R2O00459 728 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 NCK2O43639 380 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 GJB6O95452 261 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 FGBP02675 491 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 ERBB2P04626 1255 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 ALDH7A1P49419 539 aaKnown RBP21.78■■□□□ 1.08
KPNA1-210ENST00000494339 RGS7P49802 495 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 EPHB4P54760 987 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 HADHBP55084 474 aaKnown RBP21.78■■□□□ 1.08
KPNA1-210ENST00000494339 MAMLD1Q13495 774 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 FAM171A1Q5VUB5 890 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 CEP57Q86XR8 500 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 THEM5Q8N1Q8 247 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 OR10T2Q8NGX3 314 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 ZNF689Q96CS4 500 aaPredicted RBP21.78■■□□□ 1.08
KPNA1-210ENST00000494339 HNRNPABQ99729 332 aaKnown RBP21.78■■□□□ 1.08
KPNA1-210ENST00000494339 ACBD6Q9BR61 282 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 MED10Q9BTT4 135 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 PACSIN2Q9UNF0 486 aaPredicted RBP21.78■■□□□ 1.08
KPNA1-210ENST00000494339 TMEM110-MUSTN1A8MSY1 372 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 MTA2O94776 668 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 BCAT1P54687 386 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 SPOUT1Q5T280 376 aaKnown RBP21.78■■□□□ 1.08
KPNA1-210ENST00000494339 PLEKHA7Q6IQ23 1121 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 PMF1Q6P1K2 205 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 SLC35F5Q8WV83 523 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 C18orf8Q96DM3 657 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 PCED1BQ96HM7 432 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 B3GALT6Q96L58 329 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 TMEM209Q96SK2 561 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 TRIM7Q9C029 511 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 ZMYND8Q9ULU4 1186 aaPredicted RBP21.78■■□□□ 1.08
KPNA1-210ENST00000494339 HYOU1Q9Y4L1 999 aa21.78■■□□□ 1.08
KPNA1-210ENST00000494339 SF3B1O75533 1304 aaKnown RBP eCLIP21.77■■□□□ 1.088e-6■■■■■ 107
KPNA1-210ENST00000494339 BST2Q10589 180 aaKnown RBP21.77■■□□□ 1.08
KPNA1-210ENST00000494339 WHAMMP3Q1A5X7 153 aa21.77■■□□□ 1.08
KPNA1-210ENST00000494339 INTS6LQ5JSJ4 861 aaKnown RBP21.77■■□□□ 1.08
KPNA1-210ENST00000494339 FUT10Q6P4F1 479 aa21.77■■□□□ 1.08
KPNA1-210ENST00000494339 PAQR9Q6ZVX9 377 aa21.77■■□□□ 1.08
KPNA1-210ENST00000494339 MSANTD4Q8NCY6 345 aa21.77■■□□□ 1.08
KPNA1-210ENST00000494339 MYCBPAPQ8TBZ2 947 aa21.77■■□□□ 1.08
KPNA1-210ENST00000494339 BCL7CQ8WUZ0 217 aaPredicted RBP21.77■■□□□ 1.08
KPNA1-210ENST00000494339 B3GNT5Q9BYG0 378 aa21.77■■□□□ 1.08
KPNA1-210ENST00000494339 RC3H2Q9HBD1 1191 aaKnown RBP21.77■■□□□ 1.08
KPNA1-210ENST00000494339 PARVAQ9NVD7 372 aa21.77■■□□□ 1.08
KPNA1-210ENST00000494339 ANAPC7Q9UJX3 599 aa21.77■■□□□ 1.08
KPNA1-210ENST00000494339 STRIP2Q9ULQ0 834 aa21.77■■□□□ 1.08
KPNA1-210ENST00000494339 SAR1BQ9Y6B6 198 aa21.77■■□□□ 1.08
KPNA1-210ENST00000494339 DNA2P51530 1060 aa21.76■■□□□ 1.07
KPNA1-210ENST00000494339 BTG3Q14201 252 aaPredicted RBP21.76■■□□□ 1.07
KPNA1-210ENST00000494339 MESDQ14696 234 aa21.76■■□□□ 1.07
KPNA1-210ENST00000494339 DNAJC24Q6P3W2 148 aa21.76■■□□□ 1.07
KPNA1-210ENST00000494339 SYCE1Q8N0S2 351 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms