RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 PCDHB5Q9Y5E4 795 aa12.45□□□□□ -0.42
UBA3-211ENST00000493957 A8MXQ7 604 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 TNFRSF10AO00220 468 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 CLDN5O00501 218 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 MOSPD3O75425 235 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 RHOP08100 348 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 POU2F2P09086 479 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 HAPLN1P10915 354 aaPredicted RBP12.44□□□□□ -0.42
UBA3-211ENST00000493957 CEBPBP17676 345 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 FSHRP23945 695 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 PCSK1P29120 753 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 NDST1P52848 882 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 CACNA2D1P54289 1103 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 MARSP56192 900 aaKnown RBP12.44□□□□□ -0.42
UBA3-211ENST00000493957 LRMPQ12912 555 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 PABPC1LQ4VXU2 614 aaKnown RBP12.44□□□□□ -0.42
UBA3-211ENST00000493957 PRSS36Q5K4E3 855 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 CAVIN1Q6NZI2 390 aaKnown RBP12.44□□□□□ -0.42
UBA3-211ENST00000493957 CYP26C1Q6V0L0 522 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 TMC8Q8IU68 726 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 RNF135Q8IUD6 432 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 TDRD5Q8NAT2 981 aaKnown RBP12.44□□□□□ -0.42
UBA3-211ENST00000493957 SPPL2BQ8TCT7 592 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 GIPC2Q8TF65 315 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 TAF4BQ92750 862 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 LRRC3Q9BY71 257 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 IRX2Q9BZI1 471 aaPredicted RBP12.44□□□□□ -0.42
UBA3-211ENST00000493957 NIF3L1Q9GZT8 377 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 SMOC2Q9H3U7 446 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 TMEM30AQ9NV96 361 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 RAB20Q9NX57 234 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 MUTYHQ9UIF7 546 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 COQ4Q9Y3A0 265 aa12.44□□□□□ -0.42
UBA3-211ENST00000493957 TICRRQ7Z2Z1 1910 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 STX10O60499 249 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 ASGR2P07307 311 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 MYL4P12829 197 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 PTPN2P17706 415 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 PTPN1P18031 435 aaKnown RBP12.43□□□□□ -0.42
UBA3-211ENST00000493957 CD58P19256 250 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 BDNFP23560 247 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 GBP2P32456 591 aaPredicted RBP12.43□□□□□ -0.42
UBA3-211ENST00000493957 CYP27A1Q02318 531 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 KCNH2Q12809 1159 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 MTMR3Q13615 1198 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 DDR2Q16832 855 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 DMRTA1Q5VZB9 504 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 RTL10Q7L3V2 364 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 ACOT1Q86TX2 421 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 CREBRFQ8IUR6 639 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 B3GALNT2Q8NCR0 500 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 WHAMMQ8TF30 809 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 RSAD2Q8WXG1 361 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 KAT5Q92993 513 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 PCED1BQ96HM7 432 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 B3GNT5Q9BYG0 378 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 IMPG2Q9BZV3 1241 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 ZNF518BQ9C0D4 1074 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 SAMSN1Q9NSI8 373 aaKnown RBP12.43□□□□□ -0.42
UBA3-211ENST00000493957 LIMD1Q9UGP4 676 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 MAFFQ9ULX9 164 aa12.43□□□□□ -0.42
UBA3-211ENST00000493957 COL4A3Q01955 1670 aa12.42□□□□□ -0.42
UBA3-211ENST00000493957 GNA14O95837 355 aa12.42□□□□□ -0.42
UBA3-211ENST00000493957 CCDC192P0DO97 292 aa12.42□□□□□ -0.42
UBA3-211ENST00000493957 ERCC5P28715 1186 aaPredicted RBP12.42□□□□□ -0.42
UBA3-211ENST00000493957 ALDH1A3P47895 512 aa12.42□□□□□ -0.42
UBA3-211ENST00000493957 EPHB3P54753 998 aa12.42□□□□□ -0.42
UBA3-211ENST00000493957 PLD1Q13393 1074 aa12.42□□□□□ -0.42
UBA3-211ENST00000493957 NFE2Q16621 373 aaPredicted RBP12.42□□□□□ -0.42
UBA3-211ENST00000493957 PAQR9Q6ZVX9 377 aa12.42□□□□□ -0.42
UBA3-211ENST00000493957 DNAJB7Q7Z6W7 309 aaPredicted RBP12.42□□□□□ -0.42
UBA3-211ENST00000493957 SPATA2LQ8IUW3 424 aaPredicted RBP12.42□□□□□ -0.42
UBA3-211ENST00000493957 SCN4BQ8IWT1 228 aa12.42□□□□□ -0.42
UBA3-211ENST00000493957 NPAS3Q8IXF0 933 aa12.42□□□□□ -0.42
UBA3-211ENST00000493957 LMO3Q8TAP4 145 aa12.42□□□□□ -0.42
UBA3-211ENST00000493957 MYCBPAPQ8TBZ2 947 aa12.42□□□□□ -0.42
UBA3-211ENST00000493957 C2orf15Q8WU43 125 aaKnown RBP12.42□□□□□ -0.42
UBA3-211ENST00000493957 FGF13Q92913 245 aa12.42□□□□□ -0.42
UBA3-211ENST00000493957 PSMG2Q969U7 264 aa12.42□□□□□ -0.42
UBA3-211ENST00000493957 ZNF512Q96ME7 567 aaPredicted RBP12.42□□□□□ -0.42
UBA3-211ENST00000493957 ELOVL4Q9GZR5 314 aa12.42□□□□□ -0.42
UBA3-211ENST00000493957 HSFX1Q9UBD0 423 aa12.42□□□□□ -0.42
UBA3-211ENST00000493957 USTQ9Y2C2 406 aa12.42□□□□□ -0.42
UBA3-211ENST00000493957 MRPS23Q9Y3D9 190 aaKnown RBP12.42□□□□□ -0.42
UBA3-211ENST00000493957 NR2E1Q9Y466 385 aa12.42□□□□□ -0.42
UBA3-211ENST00000493957 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.42□□□□□ -0.42
UBA3-211ENST00000493957 AFPP02771 609 aaKnown RBP12.41□□□□□ -0.42
UBA3-211ENST00000493957 COL4A2P08572 1712 aa12.41□□□□□ -0.42
UBA3-211ENST00000493957 FAM163BP0C2L3 166 aa12.41□□□□□ -0.42
UBA3-211ENST00000493957 P4HA1P13674 534 aa12.41□□□□□ -0.42
UBA3-211ENST00000493957 CCDC130P13994 396 aa12.41□□□□□ -0.42
UBA3-211ENST00000493957 HMGA1P17096 107 aaKnown RBP12.41□□□□□ -0.42
UBA3-211ENST00000493957 TUFMP49411 452 aaKnown RBP12.41□□□□□ -0.42
UBA3-211ENST00000493957 EPHA5P54756 1037 aa12.41□□□□□ -0.42
UBA3-211ENST00000493957 APBA1Q02410 837 aa12.41□□□□□ -0.42
UBA3-211ENST00000493957 TYRO3Q06418 890 aa12.41□□□□□ -0.42
UBA3-211ENST00000493957 INCA1Q0VD86 236 aa12.41□□□□□ -0.42
UBA3-211ENST00000493957 SMARCB1Q12824 385 aa12.41□□□□□ -0.42
UBA3-211ENST00000493957 STX1AQ16623 288 aa12.41□□□□□ -0.42
UBA3-211ENST00000493957 TPD52L1Q16890 204 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms