RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 STXBP5Q5T5C0 1151 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 BRAPQ7Z569 592 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 MAP4K3Q8IVH8 894 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 EFCAB3Q8N7B9 438 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 GLIS3Q8NEA6 775 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 ARMC2Q8NEN0 867 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 BEST2Q8NFU1 509 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 OR10T2Q8NGX3 314 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 NXPE3Q969Y0 559 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 RNF25Q96BH1 459 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-234ENST00000493923 CALML4Q96GE6 196 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 PGLYRP2Q96PD5 576 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 RTP3Q9BQQ7 232 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 MSTO1Q9BUK6 570 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 DDX23Q9BUQ8 820 aaKnown RBP8.76□□□□□ -1.01
HDAC6-234ENST00000493923 STRA6Q9BX79 667 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 PARD6BQ9BYG5 372 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 CCSER1Q9C0I3 900 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 PARVGQ9HBI0 331 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 ZNF334Q9HCZ1 680 aaPredicted RBP8.76□□□□□ -1.01
HDAC6-234ENST00000493923 HOMER3Q9NSC5 361 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 ETAA1Q9NY74 926 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 KCND2Q9NZV8 630 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 LARSQ9P2J5 1176 aaKnown RBP8.76□□□□□ -1.01
HDAC6-234ENST00000493923 MYO6Q9UM54 1294 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 SH3BP1Q9Y3L3 701 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 YIPF1Q9Y548 306 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 MRFAP1Q9Y605 127 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 R4GN57 208 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 NCOR2Q9Y618 2525 aa8.76□□□□□ -1.01
HDAC6-234ENST00000493923 KIF26AQ9ULI4 1882 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-234ENST00000493923 H3BQF6 201 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 H7C4K7 107 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 ARHGAP6O43182 974 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 SLC26A4O43511 780 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 SHOX2O60902 331 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-234ENST00000493923 FSBPO95073 299 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 OAZ2O95190 189 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 LRG1P02750 347 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 SETSIPP0DME0 302 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 EZRP15311 586 aaKnown RBP8.75□□□□□ -1.01
HDAC6-234ENST00000493923 PTPN2P17706 415 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 HOXC13P31276 330 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 STARD6P59095 220 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 LILRA4P59901 499 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 FZD5Q13467 585 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 MLF2Q15773 248 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-234ENST00000493923 CCDC142Q17RM4 750 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 FOXD4L6Q3SYB3 417 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-234ENST00000493923 SLC44A4Q53GD3 710 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 SPATA1Q5VX52 437 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 C9orf57Q5W0N0 161 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 ZNF280DQ6N043 979 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 PHLDB3Q6NSJ2 640 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 FOXD4L3Q6VB84 417 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-234ENST00000493923 CCDC73Q6ZRK6 1079 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 ZNF720Q7Z2F6 126 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 TAX1BP1Q86VP1 789 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 TMC8Q8IU68 726 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 ZNF687Q8N1G0 1237 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 KCTD17Q8N5Z5 321 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 ATAD1Q8NBU5 361 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 STKLD1Q8NE28 680 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 PJA1Q8NG27 643 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 SHKBP1Q8TBC3 707 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 HPS3Q969F9 1004 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 MARVELD3Q96A59 401 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 BORCS6Q96GS4 357 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 SENP8Q96LD8 212 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 LRRC3BQ96PB8 259 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 RPF1Q9H9Y2 349 aaKnown RBP8.75□□□□□ -1.01
HDAC6-234ENST00000493923 PLEKHA5Q9HAU0 1116 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 PDE11AQ9HCR9 933 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 AVENQ9NQS1 362 aaPredicted RBP8.75□□□□□ -1.01
HDAC6-234ENST00000493923 CPSF2Q9P2I0 782 aaKnown RBP8.75□□□□□ -1.01
HDAC6-234ENST00000493923 AFF4Q9UHB7 1163 aaKnown RBP8.75□□□□□ -1.01
HDAC6-234ENST00000493923 KCNH3Q9ULD8 1083 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 UBQLN1Q9UMX0 589 aaKnown RBP8.75□□□□□ -1.01
HDAC6-234ENST00000493923 SLC27A5Q9Y2P5 690 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 SRPRBQ9Y5M8 271 aaKnown RBP8.75□□□□□ -1.01
HDAC6-234ENST00000493923 STYXL1Q9Y6J8 313 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 ATG2BQ96BY7 2078 aa8.75□□□□□ -1.01
HDAC6-234ENST00000493923 DENND4CQ5VZ89 1909 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 ANO9A1A5B4 782 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 MTMR11A4FU01 709 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 PIRO00625 290 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 HCRTO43612 131 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 NEBLO76041 1014 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 KRT18P05783 430 aaKnown RBP8.74□□□□□ -1.01
HDAC6-234ENST00000493923 MYL4P12829 197 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 CPB1P15086 417 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 CYP3A5P20815 502 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 TARSP26639 723 aaKnown RBP8.74□□□□□ -1.01
HDAC6-234ENST00000493923 SLC8A1P32418 973 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 EPHA5P54756 1037 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 IFFO1Q0D2I5 559 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 DUSP4Q13115 394 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 TEAD2Q15562 447 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 WDR44Q5JSH3 913 aa8.74□□□□□ -1.01
HDAC6-234ENST00000493923 BEND6Q5SZJ8 279 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms