RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 UBE4BO95155 1302 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 MYH10P35580 1976 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 KIAA1549LQ6ZVL6 1849 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 TADA3O75528 432 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 CST3P01034 146 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-223ENST00000493618 CSH1P0DML2 217 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 CSH2P0DML3 217 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 PCSK1P29120 753 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 CTHP32929 405 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 AVPR1AP37288 418 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 RPL10AP62906 217 aaKnown RBP15.69■□□□□ 0.1
ATG4B-223ENST00000493618 SATB1Q01826 763 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 CYP24A1Q07973 514 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 GAS6Q14393 721 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 TRIM68Q6AZZ1 485 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 Q6ZS52 159 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 CEP57L1Q8IYX8 460 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 CELF5Q8N6W0 485 aaKnown RBP15.69■□□□□ 0.1
ATG4B-223ENST00000493618 XXYLT1Q8NBI6 393 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 SUMF1Q8NBK3 374 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 RIN3Q8TB24 985 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 USP13Q92995 863 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-223ENST00000493618 MYLPFQ96A32 169 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 FNBP1Q96RU3 617 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 CGRRF1Q99675 332 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 MRPL45Q9BRJ2 306 aaKnown RBP15.69■□□□□ 0.1
ATG4B-223ENST00000493618 C8orf33Q9H7E9 229 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-223ENST00000493618 TRPC7Q9HCX4 862 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 ABCB6Q9NP58 842 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 CRTAC1Q9NQ79 661 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 GKN1Q9NS71 199 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 CFAP45Q9UL16 551 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 DMXL1Q9Y485 3027 aa15.69■□□□□ 0.1
ATG4B-223ENST00000493618 F5P12259 2224 aa15.68■□□□□ 0.1
ATG4B-223ENST00000493618 NOL4O94818 638 aa15.68■□□□□ 0.1
ATG4B-223ENST00000493618 WEE1P30291 646 aa15.68■□□□□ 0.1
ATG4B-223ENST00000493618 CASP4P49662 377 aa15.68■□□□□ 0.1
ATG4B-223ENST00000493618 CYP27A1Q02318 531 aa15.68■□□□□ 0.1
ATG4B-223ENST00000493618 PSMD6Q15008 389 aa15.68■□□□□ 0.1
ATG4B-223ENST00000493618 FAM171BQ6P995 826 aa15.68■□□□□ 0.1
ATG4B-223ENST00000493618 HS2ST1Q7LGA3 356 aa15.68■□□□□ 0.1
ATG4B-223ENST00000493618 ZNF516Q92618 1163 aa15.68■□□□□ 0.1
ATG4B-223ENST00000493618 MRPS31Q92665 395 aaKnown RBP15.68■□□□□ 0.1
ATG4B-223ENST00000493618 ELMO3Q96BJ8 720 aa15.68■□□□□ 0.1
ATG4B-223ENST00000493618 THG1LQ9NWX6 298 aaKnown RBP15.68■□□□□ 0.1
ATG4B-223ENST00000493618 MAGEC2Q9UBF1 373 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-223ENST00000493618 RCOR1Q9UKL0 485 aa15.68■□□□□ 0.1
ATG4B-223ENST00000493618 NME7Q9Y5B8 376 aa15.68■□□□□ 0.1
ATG4B-223ENST00000493618 PCDHGA2Q9Y5H1 932 aa15.68■□□□□ 0.1
ATG4B-223ENST00000493618 PTPRZ1P23471 2315 aaPredicted RBP15.67■□□□□ 0.1
ATG4B-223ENST00000493618 RIF1Q5UIP0 2472 aaKnown RBP15.67■□□□□ 0.1
ATG4B-223ENST00000493618 A0A1B0GVL5 298 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 PVALEFA0A1B0GWK0 134 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 ACTN4O43707 911 aaKnown RBP15.67■□□□□ 0.1
ATG4B-223ENST00000493618 KLRC4O43908 158 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 TDGF1P13385 188 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 WARSP23381 471 aaKnown RBP15.67■□□□□ 0.1
ATG4B-223ENST00000493618 BDNFP23560 247 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 DDX6P26196 483 aaKnown RBP eCLIP15.67■□□□□ 0.1
ATG4B-223ENST00000493618 HOXC13P31276 330 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 MLLT6P55198 1093 aaPredicted RBP15.67■□□□□ 0.1
ATG4B-223ENST00000493618 LRRC32Q14392 662 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 KNOP1Q1ED39 458 aaKnown RBP15.67■□□□□ 0.1
ATG4B-223ENST00000493618 BMT2Q1RMZ1 405 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 ITPRIPL2Q3MIP1 535 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 MDH1BQ5I0G3 518 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 ATL3Q6DD88 541 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 DPH6Q7L8W6 267 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 LIMS2Q7Z4I7 341 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 MON1AQ86VX9 555 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 RALGPS2Q86X27 583 aaPredicted RBP15.67■□□□□ 0.1
ATG4B-223ENST00000493618 ZBTB44Q8NCP5 570 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 SPATA18Q8TC71 538 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 RUBCNQ92622 972 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 NELL1Q92832 810 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 PAGE5Q96GU1 130 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 MSANTD3Q96H12 275 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 SLC22A12Q96S37 553 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 CYP2S1Q96SQ9 504 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 GZF1Q9H116 711 aaPredicted RBP15.67■□□□□ 0.1
ATG4B-223ENST00000493618 SNX25Q9H3E2 840 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 EBF3Q9H4W6 596 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 HPS4Q9NQG7 708 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 TDP1Q9NUW8 608 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 C2orf42Q9NWW7 574 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 NCDNQ9UBB6 729 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 CDH9Q9ULB4 789 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 ZNF292O60281 2723 aa15.67■□□□□ 0.1
ATG4B-223ENST00000493618 EXOC3O60645 756 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 LILRB5O75023 590 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 CLSTN1O94985 981 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 PDIA4P13667 645 aaKnown RBP15.66■□□□□ 0.1
ATG4B-223ENST00000493618 ARSAP15289 507 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 PFKFB1P16118 471 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 GRIK1P39086 918 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 ID4P47928 161 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 CCR3P51677 355 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 MYL6P60660 151 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 PLCB2Q00722 1185 aa15.66■□□□□ 0.1
ATG4B-223ENST00000493618 DMWDQ09019 674 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms