RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 GON4LQ3T8J9 2241 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 TADA3O75528 432 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 PIGRP01833 764 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 CDC25AP30304 524 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 HOXD12P35452 270 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 IFNAR2P48551 515 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 NCKAP1LP55160 1127 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 NR1H3Q13133 447 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 PEAR1Q5VY43 1037 aaPredicted RBP15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 JADE1Q6IE81 842 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 ANO7Q6IWH7 933 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 KCNK18Q7Z418 384 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 LRRTM3Q86VH5 581 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 SYT12Q8IV01 421 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 DCP1BQ8IZD4 617 aaKnown RBP15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 KCTD17Q8N5Z5 321 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 MDGA1Q8NFP4 955 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 BICD1Q96G01 975 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 TRMT2BQ96GJ1 504 aaKnown RBP15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 ABI2Q9NYB9 513 aaPredicted RBP15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 PCDHB5Q9Y5E4 795 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 PCDH15Q96QU1 1955 aa15.38■□□□□ 0.05
PRPF40A-211ENST00000493468 ADAMTS9Q9P2N4 1935 aa15.37■□□□□ 0.05
PRPF40A-211ENST00000493468 SETXQ7Z333 2677 aaKnown RBP15.37■□□□□ 0.05
PRPF40A-211ENST00000493468 ENGP17813 658 aa15.37■□□□□ 0.05
PRPF40A-211ENST00000493468 RDXP35241 583 aaKnown RBP15.37■□□□□ 0.05
PRPF40A-211ENST00000493468 P2RY2P41231 377 aa15.37■□□□□ 0.05
PRPF40A-211ENST00000493468 LIG4P49917 911 aa15.37■□□□□ 0.05
PRPF40A-211ENST00000493468 SIM1P81133 766 aaPredicted RBP15.37■□□□□ 0.05
PRPF40A-211ENST00000493468 CRY1Q16526 586 aa15.37■□□□□ 0.05
PRPF40A-211ENST00000493468 LMBRD2Q68DH5 695 aaPredicted RBP15.37■□□□□ 0.05
PRPF40A-211ENST00000493468 SLC23A3Q6PIS1 610 aa15.37■□□□□ 0.05
PRPF40A-211ENST00000493468 LPCAT2Q7L5N7 544 aa15.37■□□□□ 0.05
PRPF40A-211ENST00000493468 LEO1Q8WVC0 666 aaPredicted RBP15.37■□□□□ 0.05
PRPF40A-211ENST00000493468 SPACA7Q96KW9 195 aa15.37■□□□□ 0.05
PRPF40A-211ENST00000493468 MYRFLQ96LU7 910 aa15.37■□□□□ 0.05
PRPF40A-211ENST00000493468 NOL7Q9UMY1 257 aaKnown RBP15.37■□□□□ 0.05
PRPF40A-211ENST00000493468 GPSM3Q9Y4H4 160 aa15.37■□□□□ 0.05
PRPF40A-211ENST00000493468 WNT6Q9Y6F9 365 aa15.37■□□□□ 0.05
PRPF40A-211ENST00000493468 TRAV19A0A0A6YYK7 116 aa15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 SPAARA0A1B0GVQ0 90 aa15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 K7EQS6 105 aa15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 LAD1O00515 517 aa15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 CYB561D2O14569 222 aa15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 HNRNPDLO14979 420 aaKnown RBP15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 ALDH1A2O94788 518 aa15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 NOL4O94818 638 aa15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 NFICP08651 508 aa15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 USP17L7P0C7H9 530 aa15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 TAF6P49848 677 aa15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 MRPS21P82921 87 aaKnown RBP15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 GUCY1B3Q02153 619 aa15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 HNRNPDQ14103 355 aaKnown RBP15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 TMEM132DQ14C87 1099 aa15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 NFE2Q16621 373 aaPredicted RBP15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 ZNF423Q2M1K9 1284 aa15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 HSF5Q4G112 596 aaPredicted RBP15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 HYIQ5T013 277 aa15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 PYM1Q9BRP8 204 aaKnown RBP15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 MMTAG2Q9BU76 263 aaKnown RBP15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 ASB7Q9H672 318 aa15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 ABCB6Q9NP58 842 aa15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 LARSQ9P2J5 1176 aaKnown RBP15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 CPSF3Q9UKF6 684 aaKnown RBP15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 C2CD2Q9Y426 696 aa15.36■□□□□ 0.05
PRPF40A-211ENST00000493468 A0A0B4J269 797 aa15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 PP2D1A8MPX8 630 aa15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 NFATC1O95644 943 aa15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 CKMP06732 381 aa15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 OPRD1P41143 372 aa15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 PRPHP41219 470 aa15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 MAPK8P45983 427 aa15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 RPL10AP62906 217 aaKnown RBP15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 WSCD1Q658N2 575 aa15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 RAB44Q7Z6P3 723 aaPredicted RBP15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 EFCAB13Q8IY85 973 aa15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 KIAA1958Q8N8K9 716 aa15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 SYT2Q8N9I0 419 aaPredicted RBP15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 WHAMMQ8TF30 809 aa15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 C8orf76Q96K31 380 aa15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 FNBP1Q96RU3 617 aa15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 MAGED2Q9UNF1 606 aaPredicted RBP15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 ACACAQ13085 2346 aa15.35■□□□□ 0.05
PRPF40A-211ENST00000493468 PRPF40AO75400 957 aaKnown RBP15.34■□□□□ 0.05
PRPF40A-211ENST00000493468 GPR15P49685 360 aa15.34■□□□□ 0.05
PRPF40A-211ENST00000493468 TSPY1Q01534 308 aa15.34■□□□□ 0.05
PRPF40A-211ENST00000493468 RAD51AP2Q09MP3 1159 aa15.34■□□□□ 0.05
PRPF40A-211ENST00000493468 ST3GAL1Q11201 340 aa15.34■□□□□ 0.05
PRPF40A-211ENST00000493468 BYSLQ13895 437 aaKnown RBP15.34■□□□□ 0.05
PRPF40A-211ENST00000493468 SOWAHCQ53LP3 525 aaPredicted RBP15.34■□□□□ 0.05
PRPF40A-211ENST00000493468 C2orf27AQ580R0 203 aa15.34■□□□□ 0.05
PRPF40A-211ENST00000493468 HDDC3Q8N4P3 179 aa15.34■□□□□ 0.05
PRPF40A-211ENST00000493468 CEP76Q8TAP6 659 aa15.34■□□□□ 0.05
PRPF40A-211ENST00000493468 SLC22A12Q96S37 553 aa15.34■□□□□ 0.05
PRPF40A-211ENST00000493468 MSTO1Q9BUK6 570 aa15.34■□□□□ 0.05
PRPF40A-211ENST00000493468 TMEM74BQ9NUR3 256 aa15.34■□□□□ 0.05
PRPF40A-211ENST00000493468 TMLHEQ9NVH6 421 aa15.34■□□□□ 0.05
PRPF40A-211ENST00000493468 GCNT4Q9P109 453 aa15.34■□□□□ 0.05
PRPF40A-211ENST00000493468 PILRBQ9UKJ0 227 aa15.34■□□□□ 0.05
PRPF40A-211ENST00000493468 ARHGAP26Q9UNA1 814 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms