RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 CLCN1P35523 988 aa18.28■□□□□ 0.52
LIME1-208ENST00000493265 KRT9P35527 623 aa18.28■□□□□ 0.52
LIME1-208ENST00000493265 ADKP55263 362 aaKnown RBP18.28■□□□□ 0.52
LIME1-208ENST00000493265 CYP27A1Q02318 531 aa18.28■□□□□ 0.52
LIME1-208ENST00000493265 SFMBT2Q5VUG0 894 aa18.28■□□□□ 0.52
LIME1-208ENST00000493265 EP400NLQ6ZTU2 488 aa18.28■□□□□ 0.52
LIME1-208ENST00000493265 FAM71AQ8IYT1 594 aa18.28■□□□□ 0.52
LIME1-208ENST00000493265 DCP1BQ8IZD4 617 aaKnown RBP18.28■□□□□ 0.52
LIME1-208ENST00000493265 IQCDQ96DY2 449 aa18.28■□□□□ 0.52
LIME1-208ENST00000493265 KLHL5Q96PQ7 755 aa18.28■□□□□ 0.52
LIME1-208ENST00000493265 EDEM3Q9BZQ6 932 aa18.28■□□□□ 0.52
LIME1-208ENST00000493265 THAP12O43422 761 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 SPATA31D3P0C874 917 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 ADORA2BP29275 332 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 GNA15P30679 374 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 NDUFV1P49821 464 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 ZNF132P52740 706 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 ZBED6P86452 979 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 ROR1Q01973 937 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 TBX2Q13207 712 aaPredicted RBP18.27■□□□□ 0.52
LIME1-208ENST00000493265 ASIC2Q16515 512 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 PDE12Q6L8Q7 609 aaKnown RBP18.27■□□□□ 0.52
LIME1-208ENST00000493265 RNF19BQ6ZMZ0 732 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 SPATA31D4Q6ZUB0 917 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.27■□□□□ 0.52
LIME1-208ENST00000493265 ADGRD2Q7Z7M1 963 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 SLC47A2Q86VL8 602 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 CRYBG2Q8N1P7 616 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 MYLPFQ96A32 169 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 OXCT2Q9BYC2 517 aaPredicted RBP18.27■□□□□ 0.52
LIME1-208ENST00000493265 RHOBTB2Q9BYZ6 727 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 FAM124BQ9H5Z6 455 aaPredicted RBP18.27■□□□□ 0.52
LIME1-208ENST00000493265 RXFP1Q9HBX9 757 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 ABI2Q9NYB9 513 aaPredicted RBP18.27■□□□□ 0.52
LIME1-208ENST00000493265 FNIP2Q9P278 1114 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 CNTN6Q9UQ52 1028 aa18.27■□□□□ 0.52
LIME1-208ENST00000493265 WDR27A2RRH5 827 aa18.26■□□□□ 0.51
LIME1-208ENST00000493265 AKR1B15C9JRZ8 316 aaPredicted RBP18.26■□□□□ 0.51
LIME1-208ENST00000493265 CLDN5O00501 218 aa18.26■□□□□ 0.51
LIME1-208ENST00000493265 MFAP3LO75121 409 aa18.26■□□□□ 0.51
LIME1-208ENST00000493265 ADH1AP07327 375 aa18.26■□□□□ 0.51
LIME1-208ENST00000493265 PAEPP09466 180 aa18.26■□□□□ 0.51
LIME1-208ENST00000493265 PTK2Q05397 1052 aa18.26■□□□□ 0.51
LIME1-208ENST00000493265 SGO2Q562F6 1265 aa18.26■□□□□ 0.51
LIME1-208ENST00000493265 TCEAL5Q5H9L2 206 aa18.26■□□□□ 0.51
LIME1-208ENST00000493265 TAF3Q5VWG9 929 aa18.26■□□□□ 0.51
LIME1-208ENST00000493265 SLC8B1Q6J4K2 584 aa18.26■□□□□ 0.51
LIME1-208ENST00000493265 SPATA2LQ8IUW3 424 aaPredicted RBP18.26■□□□□ 0.51
LIME1-208ENST00000493265 MYCBPAPQ8TBZ2 947 aa18.26■□□□□ 0.51
LIME1-208ENST00000493265 SLC2A14Q8TDB8 520 aa18.26■□□□□ 0.51
LIME1-208ENST00000493265 TFAP2BQ92481 460 aa18.26■□□□□ 0.51
LIME1-208ENST00000493265 CYFIP2Q96F07 1278 aa18.26■□□□□ 0.51
LIME1-208ENST00000493265 B3GNT5Q9BYG0 378 aa18.26■□□□□ 0.51
LIME1-208ENST00000493265 IGFLR1Q9H665 355 aa18.26■□□□□ 0.51
LIME1-208ENST00000493265 TLE6Q9H808 572 aa18.26■□□□□ 0.51
LIME1-208ENST00000493265 ARIH1Q9Y4X5 557 aaPredicted RBP18.26■□□□□ 0.51
LIME1-208ENST00000493265 MYO7AQ13402 2215 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 FAM170AA1A519 330 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 GRXCR2A6NFK2 248 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 VDRP11473 427 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 SKILP12757 684 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 FERP16591 822 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 NRIP1P48552 1158 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 PDE6CP51160 858 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 GPR17Q13304 367 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 MAPRE1Q15691 268 aaKnown RBP18.25■□□□□ 0.51
LIME1-208ENST00000493265 TSR1Q2NL82 804 aaKnown RBP18.25■□□□□ 0.51
LIME1-208ENST00000493265 GOLGA7BQ2TAP0 167 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 PPP1R26Q5T8A7 1209 aaPredicted RBP18.25■□□□□ 0.51
LIME1-208ENST00000493265 E4F1Q66K89 784 aaPredicted RBP18.25■□□□□ 0.51
LIME1-208ENST00000493265 LLGL2Q6P1M3 1020 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 FAM171BQ6P995 826 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 GPR65Q8IYL9 337 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 ATAD1Q8NBU5 361 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 PCED1BQ96HM7 432 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 PKMYT1Q99640 499 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 MYO6Q9UM54 1294 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 SLC27A5Q9Y2P5 690 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 PCDHB5Q9Y5E4 795 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 IRAK3Q9Y616 596 aa18.25■□□□□ 0.51
LIME1-208ENST00000493265 MTMR11A4FU01 709 aa18.24■□□□□ 0.51
LIME1-208ENST00000493265 GOLGA6L6A8MZA4 724 aa18.24■□□□□ 0.51
LIME1-208ENST00000493265 CLASP2O75122 1294 aaKnown RBP18.24■□□□□ 0.51
LIME1-208ENST00000493265 CYP11B1P15538 503 aa18.24■□□□□ 0.51
LIME1-208ENST00000493265 BDNFP23560 247 aa18.24■□□□□ 0.51
LIME1-208ENST00000493265 BPIFB4P59827 614 aa18.24■□□□□ 0.51
LIME1-208ENST00000493265 ADCY1Q08828 1119 aa18.24■□□□□ 0.51
LIME1-208ENST00000493265 RAB33AQ14088 237 aa18.24■□□□□ 0.51
LIME1-208ENST00000493265 NFE2Q16621 373 aaPredicted RBP18.24■□□□□ 0.51
LIME1-208ENST00000493265 C4orf50Q6ZRC1 276 aa18.24■□□□□ 0.51
LIME1-208ENST00000493265 NOP9Q86U38 636 aaKnown RBP18.24■□□□□ 0.51
LIME1-208ENST00000493265 CNGA4Q8IV77 575 aa18.24■□□□□ 0.51
LIME1-208ENST00000493265 OR8K1Q8NGG5 319 aa18.24■□□□□ 0.51
LIME1-208ENST00000493265 SLC20A1Q8WUM9 679 aa18.24■□□□□ 0.51
LIME1-208ENST00000493265 ZSWIM1Q9BR11 485 aa18.24■□□□□ 0.51
LIME1-208ENST00000493265 ZNF518BQ9C0D4 1074 aa18.24■□□□□ 0.51
LIME1-208ENST00000493265 PDCL3Q9H2J4 239 aa18.24■□□□□ 0.51
LIME1-208ENST00000493265 MUC6Q6W4X9 2439 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 TGM5O43548 720 aa18.23■□□□□ 0.51
LIME1-208ENST00000493265 SOAT2O75908 522 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms