RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SLC38A7Q9NVC3 462 aa14.82□□□□□ -0.04
PTPN7-216ENST00000492977 TSPAN16Q9UKR8 245 aa14.82□□□□□ -0.04
PTPN7-216ENST00000492977 TCRBV7S2A1N4TA0A589 114 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 F8VP50 259 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 GOLGA8SH3BPF8 625 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 CTSHP09668 335 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 RFC1P35251 1148 aaPredicted RBP14.81□□□□□ -0.04
PTPN7-216ENST00000492977 MAP2K2P36507 400 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 GNL1P36915 607 aaPredicted RBP14.81□□□□□ -0.04
PTPN7-216ENST00000492977 COILP38432 576 aaPredicted RBP14.81□□□□□ -0.04
PTPN7-216ENST00000492977 THPOP40225 353 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 PTGIRP43119 386 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 SNX16P57768 344 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 OGDHQ02218 1023 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 SOX4Q06945 474 aaPredicted RBP14.81□□□□□ -0.04
PTPN7-216ENST00000492977 PTK7Q13308 1070 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 HLTFQ14527 1009 aaKnown RBP eCLIP14.81□□□□□ -0.04
PTPN7-216ENST00000492977 ACAP1Q15027 740 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 PKDCCQ504Y2 493 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 ALS2CLQ60I27 953 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 ARHGAP17Q68EM7 881 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 DUPD1Q68J44 220 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 DPH6Q7L8W6 267 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 ACOT1Q86TX2 421 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 JAMLQ86YT9 394 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 CRYBG2Q8N1P7 616 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 APPL2Q8NEU8 664 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 UBA3Q8TBC4 463 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 RAET1EQ8TD07 263 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 RBM41Q96IZ5 413 aaKnown RBP14.81□□□□□ -0.04
PTPN7-216ENST00000492977 TRAIPQ9BWF2 469 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 SNX25Q9H3E2 840 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 RNF19AQ9NV58 838 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 DDX56Q9NY93 547 aaKnown RBP14.81□□□□□ -0.04
PTPN7-216ENST00000492977 ARIH1Q9Y4X5 557 aaPredicted RBP14.81□□□□□ -0.04
PTPN7-216ENST00000492977 A8MXQ7 604 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 PTGESO14684 152 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 DAPK3O43293 454 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 PFKMP08237 780 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 PSMA2P25787 234 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 OAS2P29728 719 aaKnown RBP14.81□□□□□ -0.04
PTPN7-216ENST00000492977 ECHS1P30084 290 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 GBP1P32455 592 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 LILRA4P59901 499 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 COPS2P61201 443 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 CAMK2BQ13554 666 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 ITGA7Q13683 1181 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 GOLGA7BQ2TAP0 167 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 HSP90B2PQ58FF3 399 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 PPP1R26Q5T8A7 1209 aaPredicted RBP14.81□□□□□ -0.04
PTPN7-216ENST00000492977 DAB2IPQ5VWQ8 1189 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 POLNQ7Z5Q5 900 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 MRPL10Q7Z7H8 261 aaKnown RBP14.81□□□□□ -0.04
PTPN7-216ENST00000492977 CCDC50Q8IVM0 306 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 CCDC105Q8IYK2 499 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 TOP6BLQ8N6T0 577 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 C12orf29Q8N999 325 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 STK32AQ8WU08 396 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 SLCO2A1Q92959 643 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 HESX1Q9UBX0 185 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 TJP2Q9UDY2 1190 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 FEZ2Q9UHY8 353 aaPredicted RBP14.81□□□□□ -0.04
PTPN7-216ENST00000492977 GIT1Q9Y2X7 761 aa14.81□□□□□ -0.04
PTPN7-216ENST00000492977 THSD7BQ9C0I4 1608 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 SPTLC1O15269 473 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 HUS1O60921 280 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 ZNF623O75123 536 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 CAND2O75155 1236 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 FAM153BP0C7A2 387 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 RAB27AP51159 221 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 APLP1P51693 650 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 ACLYP53396 1101 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 KLF1Q13351 362 aaPredicted RBP14.8□□□□□ -0.04
PTPN7-216ENST00000492977 FAM153CQ494X1 144 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 FAM26DQ5JW98 314 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 TTC27Q6P3X3 843 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 DDX42Q86XP3 938 aaKnown RBP eCLIP14.8□□□□□ -0.04
PTPN7-216ENST00000492977 KBTBD7Q8WVZ9 684 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 TRIM51Q9BSJ1 452 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 TSEN34Q9BSV6 310 aaKnown RBP14.8□□□□□ -0.04
PTPN7-216ENST00000492977 SLC4A5Q9BY07 1137 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 OSBPL8Q9BZF1 889 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 AGO3Q9H9G7 860 aaKnown RBP14.8□□□□□ -0.04
PTPN7-216ENST00000492977 METTL5Q9NRN9 209 aaKnown RBP14.8□□□□□ -0.04
PTPN7-216ENST00000492977 FAM153AQ9UHL3 310 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 NME7Q9Y5B8 376 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 SQORQ9Y6N5 450 aa14.8□□□□□ -0.04
PTPN7-216ENST00000492977 GOLGA6BA6NDN3 693 aa14.79□□□□□ -0.04
PTPN7-216ENST00000492977 MOXD2PA6NHM9 499 aa14.79□□□□□ -0.04
PTPN7-216ENST00000492977 H3BQF6 201 aa14.79□□□□□ -0.04
PTPN7-216ENST00000492977 THP07101 528 aa14.79□□□□□ -0.04
PTPN7-216ENST00000492977 KRT7P08729 469 aa14.79□□□□□ -0.04
PTPN7-216ENST00000492977 RALAP11233 206 aa14.79□□□□□ -0.04
PTPN7-216ENST00000492977 WARSP23381 471 aaKnown RBP14.79□□□□□ -0.04
PTPN7-216ENST00000492977 PTPN7P35236 360 aa14.79□□□□□ -0.04
PTPN7-216ENST00000492977 HSPA9P38646 679 aaKnown RBP14.79□□□□□ -0.04
PTPN7-216ENST00000492977 ARHGEF6Q15052 776 aa14.79□□□□□ -0.04
PTPN7-216ENST00000492977 HADHQ16836 314 aaKnown RBP14.79□□□□□ -0.04
PTPN7-216ENST00000492977 SYDE1Q6ZW31 735 aaPredicted RBP14.79□□□□□ -0.04
PTPN7-216ENST00000492977 TMEM110Q86TL2 294 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms