RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 TRIP11Q15643 1979 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 IFNB1P01574 187 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 ERBB2P04626 1255 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 CD48P09326 243 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 CETN2P41208 172 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 GPS1Q13098 491 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 PIGHQ14442 188 aaPredicted RBP13.54□□□□□ -0.24
PRAME-213ENST00000492657 FASTKD3Q14CZ7 662 aaKnown RBP13.54□□□□□ -0.24
PRAME-213ENST00000492657 SLC10A6Q3KNW5 377 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 PREPLQ4J6C6 727 aaPredicted RBP13.54□□□□□ -0.24
PRAME-213ENST00000492657 RAB6CQ53S08 254 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 ANKRD20A8PQ5CZ79 823 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 PPP1R2P3Q6NXS1 205 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 MAMDC4Q6UXC1 1216 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 CAPN12Q6ZSI9 719 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 EXOC8Q8IYI6 725 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 ANKRD42Q8N9B4 389 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 CXorf38Q8TB03 319 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 UBA3Q8TBC4 463 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 THOC1Q96FV9 657 aaKnown RBP13.54□□□□□ -0.24
PRAME-213ENST00000492657 RBM15Q96T37 977 aaKnown RBP eCLIP13.54□□□□□ -0.244e-15■■■□□ 14.6
PRAME-213ENST00000492657 ZNF518BQ9C0D4 1074 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 RAB6CQ9H0N0 254 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 MROH8Q9H579 483 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 PDZD7Q9H5P4 517 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 SAYSD1Q9NPB0 183 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.54□□□□□ -0.24
PRAME-213ENST00000492657 CCDC189A1A4V9 331 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 C3orf70A6NLC5 250 aaPredicted RBP13.54□□□□□ -0.24
PRAME-213ENST00000492657 ARF4P18085 180 aaPredicted RBP13.54□□□□□ -0.24
PRAME-213ENST00000492657 ADCYAP1R1P41586 468 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 MAGEA4P43358 317 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 YWHAEP62258 255 aaKnown RBP13.54□□□□□ -0.24
PRAME-213ENST00000492657 CAV1Q03135 178 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 SNCBQ16143 134 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 MAP1SQ66K74 1059 aaPredicted RBP13.54□□□□□ -0.24
PRAME-213ENST00000492657 VSTM1Q6UX27 236 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 ALLCQ8N6M5 410 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 BCO2Q9BYV7 579 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 SYNCQ9H7C4 482 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 KCNK9Q9NPC2 374 aa13.54□□□□□ -0.24
PRAME-213ENST00000492657 METTL5Q9NRN9 209 aaKnown RBP13.54□□□□□ -0.24
PRAME-213ENST00000492657 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.53□□□□□ -0.24
PRAME-213ENST00000492657 TMEM120BA0PK00 339 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 LRCH4O75427 683 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 BANF1O75531 89 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 VIMP08670 466 aaKnown RBP13.53□□□□□ -0.24
PRAME-213ENST00000492657 POLR2BP30876 1174 aaKnown RBP13.53□□□□□ -0.24
PRAME-213ENST00000492657 SLC26A2P50443 739 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 TFDP3Q5H9I0 405 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 LRRC38Q5VT99 294 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 FASTKD5Q7L8L6 764 aaKnown RBP13.53□□□□□ -0.24
PRAME-213ENST00000492657 ARMC9Q7Z3E5 817 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 SERPINB12Q96P63 405 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 ACTR5Q9H9F9 607 aaPredicted RBP13.53□□□□□ -0.24
PRAME-213ENST00000492657 RNF19AQ9NV58 838 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 SIGLEC16A6NMB1 481 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 GOLGA8MH3BSY2 632 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 ASAP2O43150 1006 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 MICAL2O94851 1124 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 GH1P01241 217 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 PECAM1P16284 738 aaPredicted RBP13.53□□□□□ -0.24
PRAME-213ENST00000492657 PEX19P40855 299 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 PHKA2P46019 1235 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 GAD2Q05329 585 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 MTM1Q13496 603 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 EAPPQ56P03 285 aaPredicted RBP13.53□□□□□ -0.24
PRAME-213ENST00000492657 CROCCP2Q86T23 111 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 XYLT1Q86Y38 959 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 ADAM33Q9BZ11 813 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 PRMT7Q9NVM4 692 aaPredicted RBP13.53□□□□□ -0.24
PRAME-213ENST00000492657 AGAP1Q9UPQ3 857 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 NAALADL1Q9UQQ1 740 aa13.53□□□□□ -0.24
PRAME-213ENST00000492657 DNALI1O14645 258 aaPredicted RBP13.52□□□□□ -0.24
PRAME-213ENST00000492657 IL18RAPO95256 599 aa13.52□□□□□ -0.24
PRAME-213ENST00000492657 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.24
PRAME-213ENST00000492657 ADORA2AP29274 412 aa13.52□□□□□ -0.24
PRAME-213ENST00000492657 SCTRP47872 440 aa13.52□□□□□ -0.24
PRAME-213ENST00000492657 VCPP55072 806 aaKnown RBP13.52□□□□□ -0.24
PRAME-213ENST00000492657 SLC25A11Q02978 314 aaKnown RBP13.52□□□□□ -0.24
PRAME-213ENST00000492657 PTPN11Q06124 597 aaPredicted RBP13.52□□□□□ -0.24
PRAME-213ENST00000492657 OASLQ15646 514 aaKnown RBP13.52□□□□□ -0.24
PRAME-213ENST00000492657 SH3PXD2AQ5TCZ1 1133 aa13.52□□□□□ -0.24
PRAME-213ENST00000492657 ILDR2Q71H61 639 aa13.52□□□□□ -0.24
PRAME-213ENST00000492657 TAX1BP1Q86VP1 789 aa13.52□□□□□ -0.24
PRAME-213ENST00000492657 ZCCHC9Q8N567 271 aaKnown RBP13.52□□□□□ -0.24
PRAME-213ENST00000492657 ELAC2Q9BQ52 826 aaKnown RBP13.52□□□□□ -0.24
PRAME-213ENST00000492657 STMN4Q9H169 189 aaPredicted RBP13.52□□□□□ -0.24
PRAME-213ENST00000492657 KAT6AQ92794 2004 aa13.52□□□□□ -0.25
PRAME-213ENST00000492657 ASB14A6NK59 587 aa13.52□□□□□ -0.25
PRAME-213ENST00000492657 M0QYV0 167 aa13.52□□□□□ -0.25
PRAME-213ENST00000492657 SGK1O00141 431 aa13.52□□□□□ -0.25
PRAME-213ENST00000492657 NRLP54845 237 aa13.52□□□□□ -0.25
PRAME-213ENST00000492657 GDF10P55107 478 aa13.52□□□□□ -0.25
PRAME-213ENST00000492657 ZNF484Q5JVG2 852 aa13.52□□□□□ -0.25
PRAME-213ENST00000492657 NIPA2Q8N8Q9 360 aa13.52□□□□□ -0.25
PRAME-213ENST00000492657 CCDC197Q8NCU1 140 aa13.52□□□□□ -0.25
PRAME-213ENST00000492657 GDAP1Q8TB36 358 aa13.52□□□□□ -0.25
PRAME-213ENST00000492657 MRRFQ96E11 262 aaKnown RBP13.52□□□□□ -0.25
PRAME-213ENST00000492657 STAMBPL1Q96FJ0 436 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms