RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 FAM171BQ6P995 826 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 C4orf50Q6ZRC1 276 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 C1orf210Q8IVY1 113 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 PARD3BQ8TEW8 1205 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 LRRC3BQ96PB8 259 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 SLC46A2Q9BY10 475 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 XYLT2Q9H1B5 865 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 SNX25Q9H3E2 840 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 TRPV5Q9NQA5 729 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 MAGEC2Q9UBF1 373 aaPredicted RBP16.04■□□□□ 0.16
TOM1-215ENST00000491987 NXF1Q9UBU9 619 aaKnown RBP16.04■□□□□ 0.16
TOM1-215ENST00000491987 MAPK8IP1Q9UQF2 711 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 MRPS17Q9Y2R5 130 aaKnown RBP16.04■□□□□ 0.16
TOM1-215ENST00000491987 NME7Q9Y5B8 376 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 PIAS3Q9Y6X2 628 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 MIA3Q5JRA6 1907 aa16.04■□□□□ 0.16
TOM1-215ENST00000491987 MYO15AQ9UKN7 3530 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 PROB1E7EW31 1015 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 ARNTLO00327 626 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 CHADO15335 359 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 CALUO43852 315 aaPredicted RBP16.03■□□□□ 0.16
TOM1-215ENST00000491987 TACC1O75410 805 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 NOL4O94818 638 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 KIF20AO95235 890 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 STAU1O95793 577 aaKnown RBP16.03■□□□□ 0.16
TOM1-215ENST00000491987 ATICP31939 592 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 DLG4P78352 724 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 CYP27A1Q02318 531 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 MDH1BQ5I0G3 518 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 CEP135Q66GS9 1140 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 CMTM8Q8IZV2 173 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 MAB21L3Q8N8X9 362 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 OR6B3Q8NGW1 331 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 CSGALNACT1Q8TDX6 532 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 TMEM174Q8WUU8 243 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 MRPS31Q92665 395 aaKnown RBP16.03■□□□□ 0.16
TOM1-215ENST00000491987 SYAP1Q96A49 352 aaPredicted RBP16.03■□□□□ 0.16
TOM1-215ENST00000491987 ELMO3Q96BJ8 720 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 ZFYVE19Q96K21 471 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 NELL2Q99435 816 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 SPATA6Q9NWH7 488 aaPredicted RBP16.03■□□□□ 0.16
TOM1-215ENST00000491987 OBP2AQ9NY56 170 aa16.03■□□□□ 0.16
TOM1-215ENST00000491987 NDRG2Q9UN36 371 aaKnown RBP16.03■□□□□ 0.16
TOM1-215ENST00000491987 MAN2B1O00754 1011 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 TADA3O75528 432 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 C4BPAP04003 597 aaKnown RBP16.02■□□□□ 0.16
TOM1-215ENST00000491987 BDNFP23560 247 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 WEE1P30291 646 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 GNL1P36915 607 aaPredicted RBP16.02■□□□□ 0.16
TOM1-215ENST00000491987 MAGEA11P43364 429 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 SOX9P48436 509 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 AP3M2P53677 418 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 CLDN10P78369 228 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 NUCB2P80303 420 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 MAPRE1Q15691 268 aaKnown RBP16.02■□□□□ 0.16
TOM1-215ENST00000491987 ZNF699Q32M78 642 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 ARHGAP29Q52LW3 1261 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 TXNDC8Q6A555 127 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 ASCL5Q7RTU5 278 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 TTC8Q8TAM2 541 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 MYCBPAPQ8TBZ2 947 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 BPIFB1Q8TDL5 484 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 TRMT2BQ96GJ1 504 aaKnown RBP16.02■□□□□ 0.16
TOM1-215ENST00000491987 PCED1BQ96HM7 432 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 DPEP3Q9H4B8 488 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 UXTQ9UBK9 157 aaPredicted RBP16.02■□□□□ 0.16
TOM1-215ENST00000491987 TRAF3IP3Q9Y228 551 aa16.02■□□□□ 0.16
TOM1-215ENST00000491987 CACNA1HO95180 2353 aa16.02■□□□□ 0.15
TOM1-215ENST00000491987 DMDP11532 3685 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 PIEZO1Q92508 2521 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 A8MXQ7 604 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 NCAM2O15394 837 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 VNN1O95497 513 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 NR2F2P24468 414 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 DDX6P26196 483 aaKnown RBP eCLIP16.01■□□□□ 0.15
TOM1-215ENST00000491987 AVPR1AP37288 418 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 GRIK1P39086 918 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 MAGEA9P43362 315 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 RAP1GAPP47736 663 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 KPNA1P52294 538 aaPredicted RBP16.01■□□□□ 0.15
TOM1-215ENST00000491987 NCOA4Q13772 614 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 KCNB1Q14721 858 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 VSTM1Q6UX27 236 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 SCARA5Q6ZMJ2 495 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 MON1AQ86VX9 555 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 CELF5Q8N6W0 485 aaKnown RBP16.01■□□□□ 0.15
TOM1-215ENST00000491987 FAM3CQ92520 227 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 CLDN23Q96B33 292 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 SMYD3Q9H7B4 428 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 VRTNQ9H8Y1 702 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 ZMYM5Q9UJ78 669 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 CCL26Q9Y258 94 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 FRMD4BQ9Y2L6 1034 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 R4GN57 208 aa16.01■□□□□ 0.15
TOM1-215ENST00000491987 OBSL1O75147 1896 aa16■□□□□ 0.15
TOM1-215ENST00000491987 GOLGA6L4A6NEF3 574 aa16■□□□□ 0.15
TOM1-215ENST00000491987 PRR23AA6NEV1 266 aa16■□□□□ 0.15
TOM1-215ENST00000491987 LAMTOR5O43504 91 aa16■□□□□ 0.15
TOM1-215ENST00000491987 FAM163BP0C2L3 166 aa16■□□□□ 0.15
TOM1-215ENST00000491987 SP9P0CG40 484 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms